| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_3123 |
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| Symbol | panB |
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| ID | 5197867 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | + |
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| Start bp | 3432055 |
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| End bp | 3432912 |
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| Gene Length | 858 bp |
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| Protein Length | 285 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 640582671 |
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| Product | 3-methyl-2-oxobutanoate hydroxymethyltransferase |
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| Protein accession | YP_001263610 |
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| Protein GI | 148556028 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0413] Ketopantoate hydroxymethyltransferase |
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| TIGRFAM ID | [TIGR00222] 3-methyl-2-oxobutanoate hydroxymethyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 36 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.654674 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGTCCACCT TCCAGATCGA CACCGCCACC AGCCGCGCCA ATCCGACGCC GGCGCCGATG
AAGCGGCTCA CCGTCCCCGC GATCCGCGCC GCCAAGGGCA AGACGCCGGT GGTGGTGCTG
ACCGCCTACA CGATCCGGAT GGCGCAGATC CTCGATCCGC ATTGCGACAT GCTGCTGGTC
GGCGACAGCC TGGGCCAGGT GCTCTACGGC CTGCCGTCGA GCGTGCCGGT CAGCCTCGAC
ATGATGATCG CGCACGGCGC GGCGGTGGTG CGCGGCAGCT ATCACAGCCT GGTCGTCGTC
GACATGCCGT TCGGCTCCTA TGAGGAAAGC CCCGAACAGG CGTTCCGCTC GGCCGCGCGG
GTGCTCAAGG AGACCGGCGC CGCGGCGGTC AAGCTCGAGG GCGGGGCGGC GATGGCGGAG
ACGATCGCCT TCCTGACGGC GCGGGGCATA CCGGTGGTCG GCCATGTCGG CCTCACCCCG
CAGGCGGTGA ACGTGCTCGG CGGCTATGGC GCGCGCGGGC GCGGGCAGGA GGAATATGCC
CGGCTGATCG ACGACGCCAA GGCGGTCTCC CAGGCCGGGG CCTTCTCGCT GGTGGTCGAG
GGCGTGGTCG AGCCGCTGGC GATCGAGATG ACCCGCGCGA TCGACGTCCC GACGATCGGC
ATCGGCGGCT CGGTCGAATG CGACGGCCAG GTGCTCGTGA TCGACGACAT GCTGGGCATG
TTCGACCGGG TGCCGCGCTT CGTGAAGAAA TATGAGCAGC TCTCCGAGAA GATCGACGCG
GCGGTCGCGA CCTATGCCGC CGACGTCCGC GAGCGCCGCT TCCCGACCGT CGACCAGACC
TATCAGCCGA AGAAGTGA
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| Protein sequence | MSTFQIDTAT SRANPTPAPM KRLTVPAIRA AKGKTPVVVL TAYTIRMAQI LDPHCDMLLV
GDSLGQVLYG LPSSVPVSLD MMIAHGAAVV RGSYHSLVVV DMPFGSYEES PEQAFRSAAR
VLKETGAAAV KLEGGAAMAE TIAFLTARGI PVVGHVGLTP QAVNVLGGYG ARGRGQEEYA
RLIDDAKAVS QAGAFSLVVE GVVEPLAIEM TRAIDVPTIG IGGSVECDGQ VLVIDDMLGM
FDRVPRFVKK YEQLSEKIDA AVATYAADVR ERRFPTVDQT YQPKK
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