| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_3119 |
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| Symbol | |
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| ID | 5199574 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | - |
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| Start bp | 3426449 |
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| End bp | 3428194 |
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| Gene Length | 1746 bp |
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| Protein Length | 581 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 640582667 |
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| Product | peptidase S10, serine carboxypeptidase |
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| Protein accession | YP_001263606 |
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| Protein GI | 148556024 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG2939] Carboxypeptidase C (cathepsin A) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 0.83327 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGTCGGAA CCCGGCCGTC TTCGATCAGA TGCGCGGCGC TGTCCAGCCG TTCCGGCGAC
GGCGACCGGA GGGGAATTGA CGGCCGGCGA TCGATCCCGG ATGGATCGGG ACTGGTTTTC
CGCGCCCATG AGGTATCCAT GCGCCTTGCC CTGATCGCTG CCCTCGCCGC GCTGGCGACG
ACTGCCCTGC CCGCCGCCCT TTCCGCCGAG ACGCCCGAGG AGAAGGACGC GGCGGCATCC
GCCGCGCCCG CGCGCTTCCA GCCCGACGAG GTGCGATCGA CCGGATCGGT CGCCGTCGGC
GGCGTGCGCA TCCCCTATCA GGCGGTGGCG GGTACGCTGG TCGTCCATCC CAAGGGCTGG
GACGACGTCC CCCCGCGCGA CGAGGACGGC CGCAAGGCCG CGAAGGAGCA GGCCGAGGCG
TCGATGTTCT ACGTCGCCTA TTTTAGGACC GGCGCCCCCG CAGCCGGACG GCCGATCACC
TTCCTGTTCA ACGGCGGGCC GGGATCGTCG AGCATCTGGC TGCACATGGG CGCGTTCGGC
CCGGTGCGGG TCGAGGCCGG CGACGCGGGC CAGGCGTCGG CGGCGCCCTA CCGCGTCGTC
GCCAACGACA TGGCGCTGCT CGACGCGTCG GACCTCGTCT TCATCGACGC CCCCGGCACC
GGCTTCAGCC GGGTCGCGGG GAAGGACAAG GACAAGGCCT TCTACGGCGT CGACCAGGAC
ATCCACGCCT TCGCCCGCTT CATCGTCCAG TTCCTGTCGA AGCACGGCCG CTGGGCGTCG
CCCAAATATC TGTTCGGCGA AAGCTATGGC ACGATGCGCG CCGCCGGCCT CGCCAGGGCG
CTGCAGGACG AGGATGTCGA CCTGAACGGC GTGATCCTGC TGTCGGACAT ATTGAACTGG
GACCTGATCC CCGATGATCC GCAGCTCAAT CCGGGGGTCG ACCTGCCCTA TGTCGTCTCG
CTGCCGACCT ATGCGGCGAC CGCCTGGTAT CACCGTCGCG TCGCCAACCG GCCCGACGAC
CTCGCAAGCT TCCTGGCCGA GGTCGAGCGC TTCGCCACCA CCGACTATGC ATTGGCGCTG
ATGCAGGGCA ACGCGCTGCC GGCGGCCGAG CGGCAGGCGA TCGCGGAGAA GCTGTCGGGC
TATACCGGGC TGCCGGCCGC CTATCTGCTG CGGAGCAACC TGCGGATCGA ATATGGCGCG
CTGCAGAAGG AGCTGCTGCT GGACCGCGAC CTGACCACCG GCACGCTCGA CACCCGCTTC
ACCGGCTGGA CGATCGACCC GCTGAGCAAG GTCGCCGGCT ATGACCCGCA AGGGTCGGCG
ATCGGCGCGG CCTATGCCGG CGCGTTCAAC GACTATGTGC GCGGCACGCT GCGCTATGGC
GAGGGGCGGC ACTACCAGAC CAGCCTCGAC GTCTATGGCA GCTGGGACTA CCGGCACCAG
CCGCCGGGCG CCGACAAGCC GCTGATCGCG CTGCCCAACG TCCTGCCCGA CCTGGCGGTG
GCGATGAAGC GCAACCCGAC GATGAAGGTG ATGGTCAACG GCGGCTATTT CGACGTGTCG
ACGCCCTATT TCGCGGGACG CTACGAGCTG CGGCACCTGC CGGTCCCGGC CGCGCTGACC
GGCAATATCG AGTATCGCTA TTATCCGTCC GGCCACATGG TCTATCTGCA CCGGCCGTCG
CTGAAGGCGC TGCACGACAA TGTCGCCGAC TTCATCCGCC GGACCGACAA CGCCGCCGCG
AAATAA
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| Protein sequence | MVGTRPSSIR CAALSSRSGD GDRRGIDGRR SIPDGSGLVF RAHEVSMRLA LIAALAALAT
TALPAALSAE TPEEKDAAAS AAPARFQPDE VRSTGSVAVG GVRIPYQAVA GTLVVHPKGW
DDVPPRDEDG RKAAKEQAEA SMFYVAYFRT GAPAAGRPIT FLFNGGPGSS SIWLHMGAFG
PVRVEAGDAG QASAAPYRVV ANDMALLDAS DLVFIDAPGT GFSRVAGKDK DKAFYGVDQD
IHAFARFIVQ FLSKHGRWAS PKYLFGESYG TMRAAGLARA LQDEDVDLNG VILLSDILNW
DLIPDDPQLN PGVDLPYVVS LPTYAATAWY HRRVANRPDD LASFLAEVER FATTDYALAL
MQGNALPAAE RQAIAEKLSG YTGLPAAYLL RSNLRIEYGA LQKELLLDRD LTTGTLDTRF
TGWTIDPLSK VAGYDPQGSA IGAAYAGAFN DYVRGTLRYG EGRHYQTSLD VYGSWDYRHQ
PPGADKPLIA LPNVLPDLAV AMKRNPTMKV MVNGGYFDVS TPYFAGRYEL RHLPVPAALT
GNIEYRYYPS GHMVYLHRPS LKALHDNVAD FIRRTDNAAA K
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