| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_3101 |
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| Symbol | |
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| ID | 5198085 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | - |
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| Start bp | 3408972 |
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| End bp | 3409871 |
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| Gene Length | 900 bp |
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| Protein Length | 299 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 640582649 |
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| Product | polysaccharide deacetylase |
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| Protein accession | YP_001263588 |
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| Protein GI | 148556006 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0726] Predicted xylanase/chitin deacetylase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 0.40589 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.231006 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCGACC TGACCGTGTG CCTGACCTTC GACGTCGACG GGATATCCTC CTGGATCGGG
ACGGCGCGCA GCAACAATCC GAGCCTGCTG TCGCGCGGCG AGTTCACCGT GGTCGGGACG
CCGCGCGTGC TCGCCTTCCT CGAGCGCAAG GACATCCGCG CCACCTTCTT CGTCCCCGGC
CACACCGCCT GCGCCTTCCC CGACCTGGTC AAGGCGATCC GCGACGGCGG CCACGAGATC
GGCCATCACG GCTGGGTGCA CGAGAATCCG GCGGACTTCG ACCTGGCGGG CGAGACCGAC
ATATTGGAAA AGGGCTTCGA GGCGCTCGAC CGCGCCGCCG GCGTCCGCCC GATCGGCTAT
CGCTCGCCGG CCTGGGACCT CAGCCGCGAC ACGCTGCACC TTCTGAAGCG CTTCGGCTTC
CTGTATGATT CGAGCTGCAT GGCCGCCGAC TTCGAGCCTT ATTATCCGCG GACCGGCGAT
AGCTGGGGAC CCGACCGGCC CTATCGCTTC GGCCCGCTGA TCGACCTGGT CCAGATGCCG
GTCAACTGGG CGATGGACGA CTTCATCGCC TTCGAGAGCG TGATGGGCAT GATCCCCGGC
TATGTCCCGC CCCGCCAGGT CGAGGAGATG TGGCGCGACG ATTTCGACTT CGCGGTCGAC
GAATGTCCCG GCGGGGTGTT CATCCCGACG ATGCACCCCG ACTGCATCGG CCGCGCCAGC
CGGCTGCGCA TGCTCGACCG CCTCGTCGAC CATATGCGCG ACAGCGGCCG GGTCGTGTTC
GACACGATGG GGAACCATGC CCGGCGCTGG AAGGAGCGCA ACCCGATCGA CGACTGGGCC
GCCGCCAACC CGATGCGGAC CGGCGTGAAC GCGATCACCG ACATCGGGGC GCCGCGATGA
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| Protein sequence | MSDLTVCLTF DVDGISSWIG TARSNNPSLL SRGEFTVVGT PRVLAFLERK DIRATFFVPG
HTACAFPDLV KAIRDGGHEI GHHGWVHENP ADFDLAGETD ILEKGFEALD RAAGVRPIGY
RSPAWDLSRD TLHLLKRFGF LYDSSCMAAD FEPYYPRTGD SWGPDRPYRF GPLIDLVQMP
VNWAMDDFIA FESVMGMIPG YVPPRQVEEM WRDDFDFAVD ECPGGVFIPT MHPDCIGRAS
RLRMLDRLVD HMRDSGRVVF DTMGNHARRW KERNPIDDWA AANPMRTGVN AITDIGAPR
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