Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swit_3100 |
Symbol | |
ID | 5198084 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sphingomonas wittichii RW1 |
Kingdom | Bacteria |
Replicon accession | NC_009511 |
Strand | - |
Start bp | 3407464 |
End bp | 3408975 |
Gene Length | 1512 bp |
Protein Length | 503 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 640582648 |
Product | hypothetical protein |
Protein accession | YP_001263587 |
Protein GI | 148556005 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 0.444096 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.156849 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATCGAGG CCTATTGCGG CCGGCGCTCC TACGCCGCCG CCGACATCGT CGAGCTGCAC GTCTCGACCG ACGCGGGATC GTTCGACCTC GACCTGATCC GCGACGACGG CACCGCCGCG CGCGTGCTGA GCCGCACCGA GCTGCCGGGC GAGCGCCATC CGCTGCCGCC CGACGTCGTC GCGCGGGGCT GCGGCTGGCC GGCGAGCGTC CGCATCCCGG TCGATCCCGA CTGGCCCAGC GGCTTCTATC GCTTCGAGCT TCGCGCGGGC GACGGTTCGA CCGGGGACGC CTTCTTCGTG CTCCGCAGCG CCACGCCGCG CGCGTCGATC CTGTGGGTGA TCGAGACCAA CACCTGGAAC GCCTATAACA GCTTCGGCGG CGCCAGCACC TATACGACGC TCACGGAGCA GCCGCCGAAC GACAATGGGG TCGTGCCCAA CCATGGCGGC GTCCCGATCG TCTCGTTCGA GCGCCCGCTG CCCCGTGGCT TCCTCCGCCT CCCCGACGAC GCGCCGCGCG CGCCGACCGT CGGCGCGCCG AGCCGCGACA TACCCTTCAT CGGCTGGGCG CTCGAACAAG GCTATGATTT CTACAGCGGC GGGGCGAGCT GGGCGCAATG GGGCCTGAGC TTCGCGCGCT GGCTGCACCG GCAGGGCATC GCGGTCGACT GCGCGACCAA CGCCGACCTG GAGGAGTTCC CCGGACTGCT CGACGGCTAT CGGCTGATGC TGTCGACCGG CCATGACGAA TATTGGTCCT GGGGCATGCG CGACGCCGTC GAGGGCTTCA TCGCGCGCGG CGGCAACGTC GCCTTCCTCA GCGGCAACCT CGCCTTCTGG CAGGTGCGGC TGGAGGACGG TTTCCGGCGC ATGGTCGCCT ATAAGGGCGA TGTCGCCCAC GACCCGGTGA TCGGGACGGC CGACGAGCGG CGCAACACCG GCATCTGGTC GCACCCGCTG ACCGACCGGC CCGAGAACCA GATGTCGGGC CTGAGCTTCA CCCGCGGCGG CTATGCCCGC ATGGGCGGCG CGACGCCGGC CTCGGCCGGG GGCTACACCA TCTACCGGCC CGAGCATTGG GCGCTGGCGG GGACCGGGCT CAGCTATGGC GACCAGCTCG GCGCGGCCCA TTCGCTGGTC GGCTATGAGG TCGACGGCTG CGATTTCCAG TTCCGGCACG GCCGGCCGGT GCCGACCGGG CGCGACGACA CGCCCGAGCA GTTCGAGATC ATCGGCATGG CGCCGGCGGC GATCTGGTCG CACGAGACCG CCCCGCCGGG CATGTATCCG CCCACCGCCC TGTCCGACAT CGAGATGATC TGCGACCAGC TCGAAGGCAA TCACGCGCCG GAGACGATCG CCCGCCATGC CTATGGCCAT GGCATGATGG GCAGCTATGT CGCGCCCGGC GGCGGCACCG TCTTCGCCGC CGGCACCACC GAATGGACGA TGGCGCTCGA CGATCCCCAG GTGTCGCGCA TCACCCGCAA CCTGATCGAT CGGCTGGGCT GA
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Protein sequence | MIEAYCGRRS YAAADIVELH VSTDAGSFDL DLIRDDGTAA RVLSRTELPG ERHPLPPDVV ARGCGWPASV RIPVDPDWPS GFYRFELRAG DGSTGDAFFV LRSATPRASI LWVIETNTWN AYNSFGGAST YTTLTEQPPN DNGVVPNHGG VPIVSFERPL PRGFLRLPDD APRAPTVGAP SRDIPFIGWA LEQGYDFYSG GASWAQWGLS FARWLHRQGI AVDCATNADL EEFPGLLDGY RLMLSTGHDE YWSWGMRDAV EGFIARGGNV AFLSGNLAFW QVRLEDGFRR MVAYKGDVAH DPVIGTADER RNTGIWSHPL TDRPENQMSG LSFTRGGYAR MGGATPASAG GYTIYRPEHW ALAGTGLSYG DQLGAAHSLV GYEVDGCDFQ FRHGRPVPTG RDDTPEQFEI IGMAPAAIWS HETAPPGMYP PTALSDIEMI CDQLEGNHAP ETIARHAYGH GMMGSYVAPG GGTVFAAGTT EWTMALDDPQ VSRITRNLID RLG
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