Gene Swit_3100 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwit_3100 
Symbol 
ID5198084 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingomonas wittichii RW1 
KingdomBacteria 
Replicon accessionNC_009511 
Strand
Start bp3407464 
End bp3408975 
Gene Length1512 bp 
Protein Length503 aa 
Translation table11 
GC content71% 
IMG OID640582648 
Producthypothetical protein 
Protein accessionYP_001263587 
Protein GI148556005 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value0.444096 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.156849 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCGAGG CCTATTGCGG CCGGCGCTCC TACGCCGCCG CCGACATCGT CGAGCTGCAC 
GTCTCGACCG ACGCGGGATC GTTCGACCTC GACCTGATCC GCGACGACGG CACCGCCGCG
CGCGTGCTGA GCCGCACCGA GCTGCCGGGC GAGCGCCATC CGCTGCCGCC CGACGTCGTC
GCGCGGGGCT GCGGCTGGCC GGCGAGCGTC CGCATCCCGG TCGATCCCGA CTGGCCCAGC
GGCTTCTATC GCTTCGAGCT TCGCGCGGGC GACGGTTCGA CCGGGGACGC CTTCTTCGTG
CTCCGCAGCG CCACGCCGCG CGCGTCGATC CTGTGGGTGA TCGAGACCAA CACCTGGAAC
GCCTATAACA GCTTCGGCGG CGCCAGCACC TATACGACGC TCACGGAGCA GCCGCCGAAC
GACAATGGGG TCGTGCCCAA CCATGGCGGC GTCCCGATCG TCTCGTTCGA GCGCCCGCTG
CCCCGTGGCT TCCTCCGCCT CCCCGACGAC GCGCCGCGCG CGCCGACCGT CGGCGCGCCG
AGCCGCGACA TACCCTTCAT CGGCTGGGCG CTCGAACAAG GCTATGATTT CTACAGCGGC
GGGGCGAGCT GGGCGCAATG GGGCCTGAGC TTCGCGCGCT GGCTGCACCG GCAGGGCATC
GCGGTCGACT GCGCGACCAA CGCCGACCTG GAGGAGTTCC CCGGACTGCT CGACGGCTAT
CGGCTGATGC TGTCGACCGG CCATGACGAA TATTGGTCCT GGGGCATGCG CGACGCCGTC
GAGGGCTTCA TCGCGCGCGG CGGCAACGTC GCCTTCCTCA GCGGCAACCT CGCCTTCTGG
CAGGTGCGGC TGGAGGACGG TTTCCGGCGC ATGGTCGCCT ATAAGGGCGA TGTCGCCCAC
GACCCGGTGA TCGGGACGGC CGACGAGCGG CGCAACACCG GCATCTGGTC GCACCCGCTG
ACCGACCGGC CCGAGAACCA GATGTCGGGC CTGAGCTTCA CCCGCGGCGG CTATGCCCGC
ATGGGCGGCG CGACGCCGGC CTCGGCCGGG GGCTACACCA TCTACCGGCC CGAGCATTGG
GCGCTGGCGG GGACCGGGCT CAGCTATGGC GACCAGCTCG GCGCGGCCCA TTCGCTGGTC
GGCTATGAGG TCGACGGCTG CGATTTCCAG TTCCGGCACG GCCGGCCGGT GCCGACCGGG
CGCGACGACA CGCCCGAGCA GTTCGAGATC ATCGGCATGG CGCCGGCGGC GATCTGGTCG
CACGAGACCG CCCCGCCGGG CATGTATCCG CCCACCGCCC TGTCCGACAT CGAGATGATC
TGCGACCAGC TCGAAGGCAA TCACGCGCCG GAGACGATCG CCCGCCATGC CTATGGCCAT
GGCATGATGG GCAGCTATGT CGCGCCCGGC GGCGGCACCG TCTTCGCCGC CGGCACCACC
GAATGGACGA TGGCGCTCGA CGATCCCCAG GTGTCGCGCA TCACCCGCAA CCTGATCGAT
CGGCTGGGCT GA
 
Protein sequence
MIEAYCGRRS YAAADIVELH VSTDAGSFDL DLIRDDGTAA RVLSRTELPG ERHPLPPDVV 
ARGCGWPASV RIPVDPDWPS GFYRFELRAG DGSTGDAFFV LRSATPRASI LWVIETNTWN
AYNSFGGAST YTTLTEQPPN DNGVVPNHGG VPIVSFERPL PRGFLRLPDD APRAPTVGAP
SRDIPFIGWA LEQGYDFYSG GASWAQWGLS FARWLHRQGI AVDCATNADL EEFPGLLDGY
RLMLSTGHDE YWSWGMRDAV EGFIARGGNV AFLSGNLAFW QVRLEDGFRR MVAYKGDVAH
DPVIGTADER RNTGIWSHPL TDRPENQMSG LSFTRGGYAR MGGATPASAG GYTIYRPEHW
ALAGTGLSYG DQLGAAHSLV GYEVDGCDFQ FRHGRPVPTG RDDTPEQFEI IGMAPAAIWS
HETAPPGMYP PTALSDIEMI CDQLEGNHAP ETIARHAYGH GMMGSYVAPG GGTVFAAGTT
EWTMALDDPQ VSRITRNLID RLG