Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swit_3093 |
Symbol | |
ID | 5197832 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sphingomonas wittichii RW1 |
Kingdom | Bacteria |
Replicon accession | NC_009511 |
Strand | + |
Start bp | 3395241 |
End bp | 3396173 |
Gene Length | 933 bp |
Protein Length | 310 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 640582641 |
Product | hypothetical protein |
Protein accession | YP_001263580 |
Protein GI | 148555998 |
COG category | [S] Function unknown |
COG ID | [COG3246] Uncharacterized conserved protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 37 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 0.615612 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCCCAAA CCCGTAAAGT CATCATCACC TGCGCCGTCA CGGGCTCGAT CCATACGCCG TCCATGTCGG CGCATCTGCC GGTCTCCGCC GTCGAGATCG CCGATGCCGC CGTCGAGGCC GCCGAGGCGG GCGCGGCGAT CGTCCATCTC CATGCGCGGA ATCCCCTGGA CGGCCGGCCC GACCAAAGCG CCGAGGCCTT CGCCCCGATC ATCGATCGGA TCGAAAAGCG CAGCGACGTC GTCATGAACA TCACCACCGG CGGCTCGCCG TTCATGACGG TCGAACAGCG CCTGCGCCCC GCCGCCCATT TCAAGCCCGA GCTCGCCAGC CTGAACATGG GCAGCATGAA TTTCGGCCTC TTCCCGATGC TCGAGCGCTA CCAGCATTTC CGCCACCCAT GGGAGGCACG GATGCTGGCC GACAGCCGCG ACGTGGTGTT CAAGAACACC TATCAGGACA TCGCCCATGT CATCGAAACC CTCGGCGGCC ACGGCACCCG GTTCGAGTTC GAATGCTACG ATACCGCCCA CCTCCACAAC CTTCACTATT TCTGGCGCGA AGGCCTGGTG AAGGGGCCCT TGTTCATCCA GACGGTCTTC GGACTTCTCG GCGGGATCGG GTCCCATCCC GATGAGGTCC TGCACCTGAA GCGCACCGCC GACCGGTTGT TCGGAACCGA CTATGTCTGG TCGGTGCTGG GGGCCGGGGC GGCCCAGTTG CGGATAGCGG CGATGGCGGC GGCCATGGGG GGCCATGTCC GGGTCGGGCT GGAGGATTCG CTCTGGGCGG GTCCCGGACG CCTGGCGAAA TCCAACGCGG AACAGGTCGT CCAGGTCCGT CACATCATCG AAGGCCTCGG GCTGGAGGTC GCAACCCCCG ACGAAGCGCG CGCGCTGCTG GCGTTGCGGG GCGATGGGAG CGCCGCCGCG TGA
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Protein sequence | MSQTRKVIIT CAVTGSIHTP SMSAHLPVSA VEIADAAVEA AEAGAAIVHL HARNPLDGRP DQSAEAFAPI IDRIEKRSDV VMNITTGGSP FMTVEQRLRP AAHFKPELAS LNMGSMNFGL FPMLERYQHF RHPWEARMLA DSRDVVFKNT YQDIAHVIET LGGHGTRFEF ECYDTAHLHN LHYFWREGLV KGPLFIQTVF GLLGGIGSHP DEVLHLKRTA DRLFGTDYVW SVLGAGAAQL RIAAMAAAMG GHVRVGLEDS LWAGPGRLAK SNAEQVVQVR HIIEGLGLEV ATPDEARALL ALRGDGSAAA
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