Gene Swit_3093 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwit_3093 
Symbol 
ID5197832 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingomonas wittichii RW1 
KingdomBacteria 
Replicon accessionNC_009511 
Strand
Start bp3395241 
End bp3396173 
Gene Length933 bp 
Protein Length310 aa 
Translation table11 
GC content66% 
IMG OID640582641 
Producthypothetical protein 
Protein accessionYP_001263580 
Protein GI148555998 
COG category[S] Function unknown 
COG ID[COG3246] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones37 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.615612 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCCAAA CCCGTAAAGT CATCATCACC TGCGCCGTCA CGGGCTCGAT CCATACGCCG 
TCCATGTCGG CGCATCTGCC GGTCTCCGCC GTCGAGATCG CCGATGCCGC CGTCGAGGCC
GCCGAGGCGG GCGCGGCGAT CGTCCATCTC CATGCGCGGA ATCCCCTGGA CGGCCGGCCC
GACCAAAGCG CCGAGGCCTT CGCCCCGATC ATCGATCGGA TCGAAAAGCG CAGCGACGTC
GTCATGAACA TCACCACCGG CGGCTCGCCG TTCATGACGG TCGAACAGCG CCTGCGCCCC
GCCGCCCATT TCAAGCCCGA GCTCGCCAGC CTGAACATGG GCAGCATGAA TTTCGGCCTC
TTCCCGATGC TCGAGCGCTA CCAGCATTTC CGCCACCCAT GGGAGGCACG GATGCTGGCC
GACAGCCGCG ACGTGGTGTT CAAGAACACC TATCAGGACA TCGCCCATGT CATCGAAACC
CTCGGCGGCC ACGGCACCCG GTTCGAGTTC GAATGCTACG ATACCGCCCA CCTCCACAAC
CTTCACTATT TCTGGCGCGA AGGCCTGGTG AAGGGGCCCT TGTTCATCCA GACGGTCTTC
GGACTTCTCG GCGGGATCGG GTCCCATCCC GATGAGGTCC TGCACCTGAA GCGCACCGCC
GACCGGTTGT TCGGAACCGA CTATGTCTGG TCGGTGCTGG GGGCCGGGGC GGCCCAGTTG
CGGATAGCGG CGATGGCGGC GGCCATGGGG GGCCATGTCC GGGTCGGGCT GGAGGATTCG
CTCTGGGCGG GTCCCGGACG CCTGGCGAAA TCCAACGCGG AACAGGTCGT CCAGGTCCGT
CACATCATCG AAGGCCTCGG GCTGGAGGTC GCAACCCCCG ACGAAGCGCG CGCGCTGCTG
GCGTTGCGGG GCGATGGGAG CGCCGCCGCG TGA
 
Protein sequence
MSQTRKVIIT CAVTGSIHTP SMSAHLPVSA VEIADAAVEA AEAGAAIVHL HARNPLDGRP 
DQSAEAFAPI IDRIEKRSDV VMNITTGGSP FMTVEQRLRP AAHFKPELAS LNMGSMNFGL
FPMLERYQHF RHPWEARMLA DSRDVVFKNT YQDIAHVIET LGGHGTRFEF ECYDTAHLHN
LHYFWREGLV KGPLFIQTVF GLLGGIGSHP DEVLHLKRTA DRLFGTDYVW SVLGAGAAQL
RIAAMAAAMG GHVRVGLEDS LWAGPGRLAK SNAEQVVQVR HIIEGLGLEV ATPDEARALL
ALRGDGSAAA