| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_3091 |
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| Symbol | |
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| ID | 5196988 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | + |
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| Start bp | 3391484 |
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| End bp | 3393823 |
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| Gene Length | 2340 bp |
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| Protein Length | 779 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 640582639 |
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| Product | TonB-dependent receptor |
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| Protein accession | YP_001263578 |
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| Protein GI | 148555996 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.308245 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCAAGT TCAAAGCGCT CGGTTCGACG GCCATCATTG GATGCATGGC CCTCGCTCTC
ATAAGCCCGG CCCATGCGCA GGACGCCGCC GCTCCAGCCG CCGACGGCGA CGAGATCATC
GTCACCGCCC AGGGGCGCGA GCAGAATCTT CAGGACGTGC CGGTCTCCGT ATCGGCCGCC
ACCGGCATCA GCCTTCAGAA GCAGGCGATC ACGACGCTCG AGGCGCTCTC GGTGCGCCAG
CCGAACTTCC GCATCTCGCA ATCGCCGGCG TCGGACTATG TCGTGATCCG CGGCATCGGC
TCCTCGGCCA ATATCGGCTT CGAGCAGTCG GTCGGCACCT TCGTCGACGG CGTCTATCGT
GGCCGCTCCC GTTCGACCCG CGCCGCCCTG TTCGACCTGG AGCGCGTCGA GATCCTCAAG
GGTCCGCAGA CGACCTATTT CGGCAACAAC TCCATCGCCG GCGCGCTCAA CATCACCACC
CGCAAGCCCG GTCGCGATCT CGCGGTGAAC GGCACCGCCT CCTATTTCCC GAACACCGGC
GAATATCTCG TCGAGGGCGG GATCACCCTG CCGGTCACCG ACCGCCTTTC CCTGCGTCTC
GCCGCCCGCC AGTCGGGCAT GGACGGCTAT ATCAAGAACA TCCAGACCGG GAAGGACGGG
CCCCATCTCA ACGACAGGAT CGGTCGCGTC TCGATGGCCT GGGCGCCGAC GGACGGGATC
GAGATCGACG CCCGCCTCGA TGTCGGGCGG ATGCGCGATA CCTCGGTGTT CAACGTCGAA
CTGCTCGACT GCCCGACGTC CGCACCCTTC GCCGGTCCGG CGGGGCCGTG CGCCCGCTAT
CTGAACGCCA GCGGAGGCTC GGTCGACAGC AAGCTCGATC GCGTGAGCGG CGCCAATCCC
TCCTACTTCG ACTACGACAT GGTCGAAGGC GTGTGGGGGA TGAAGATCGC GGCGGGCGAC
AACACGCTCA CCCTGACGAC CGGATATTTC CACCACAAAT ATCACCTGCT CAACGACCCG
GTCCCCGTGC CCGGGACGCG CGGCGGCAGC GCCGTCGGCA CCACCACCGC GCTTCCGATC
GCGCTGTTCG AGAAATATGA CCAGGTGAGC CAGGAGCTTC GCTTCGCCTC GCCCGAGGAC
CGGACGATCA GCTACATGTT CGGCGCCTAT TACCAATATG GCAAGCTGAC GACCAACCTC
ATCCAGGGCT TCTATTTCGC TCCGGTCGCC GCGGCCACGG GCGGCCTCAT CCCGCTGGCC
ACGCCGGTGG CCGGCAGCAT CACCACCACC GAGCGCAGCG ACGTCTTCTC GGGCTTCGCC
GCCGCCACCT GGCGCGCGAC CGACGCCCTG CGCGTCAATG TGGGGGGCCG CTTCTCGCTG
GTCGACAAGC ATGATGCGCG CGCTACCCAG ATGGGGACGG CGGCCTCGAT CCCGTCGCTC
GCCAATTTCG TGCCGTTCAC CGTCGCGCTT ACCCAGCTCT ACGCGGCGAG CGGCATCAAT
CCCGGCAATT ACGCGGTGCC GAACCGCTCC GACCATGCGT TCCTGCCGAG CGCGAGCATC
CAATATGATC TGTCGCGAAA CGCCATGGCC TACGTCTCCT ATGTCGAAGG CTTCAAGGCT
GGCGGCTACT CGATCGGGAC GACCAATTCG AGCTTCGATC CCGAACGGGT GAAATCCTAC
GAGCTCGGGA TCAAGGCCGA CCTTCTCGAT CGCCTGCTGA CGGTCAACCT GGCCGGCTTC
TACAGCCGTT ACCGCAATCT CCAGGAGACC GCGACCGTCA CCTCGGGCAC GGTGGTGCGC
CAGTTCGTGA CGAACGCCGC CAAGTCCAAG GTCAAGGGCG TCGAGCTCGG GCTGACCGTG
CGGCCGAGCT CGAACGTCAC CCTGACCTCG AACGTCGCCT ATCTGTCGTC GCGCTACGCC
GATTATCCCA ATGCGCCCTG CACGACGACG CAGCAGGCGC TGGCGCCGGT GTGCGTGCAG
GACCTGTCGG GAGCGCGGCG GGCCTTCGCG CCGAAGCTGA GCGGAAATGT CGGCATGAAC
GTCACCCAGC CGCTCGGCCG CTACCAGCTC AGCTTCGACG CCAATGGCTA CTTCACCACC
CGCTTCCTCC AGATCGCGAC CGGCGACTAT CGCATCTCGC AGGAGGGCAA CGTCAAGATC
GACGCGCGGA TCGGCTTCGG TCCGGCCGAC GGCCCATGGG AACTGGCCGT CGTCGGCAAG
AACCTCACCA ACAAGCTGAC CGCGGGCTAT CGTCAGGTGG TGCCGGGCGC GACAGGCAGC
CTCGCCGCCA TGGCCGATGC CCCGCGCTCG ATCGGCCTGC AGGGTTCGTT CCATTTCTAA
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| Protein sequence | MTKFKALGST AIIGCMALAL ISPAHAQDAA APAADGDEII VTAQGREQNL QDVPVSVSAA
TGISLQKQAI TTLEALSVRQ PNFRISQSPA SDYVVIRGIG SSANIGFEQS VGTFVDGVYR
GRSRSTRAAL FDLERVEILK GPQTTYFGNN SIAGALNITT RKPGRDLAVN GTASYFPNTG
EYLVEGGITL PVTDRLSLRL AARQSGMDGY IKNIQTGKDG PHLNDRIGRV SMAWAPTDGI
EIDARLDVGR MRDTSVFNVE LLDCPTSAPF AGPAGPCARY LNASGGSVDS KLDRVSGANP
SYFDYDMVEG VWGMKIAAGD NTLTLTTGYF HHKYHLLNDP VPVPGTRGGS AVGTTTALPI
ALFEKYDQVS QELRFASPED RTISYMFGAY YQYGKLTTNL IQGFYFAPVA AATGGLIPLA
TPVAGSITTT ERSDVFSGFA AATWRATDAL RVNVGGRFSL VDKHDARATQ MGTAASIPSL
ANFVPFTVAL TQLYAASGIN PGNYAVPNRS DHAFLPSASI QYDLSRNAMA YVSYVEGFKA
GGYSIGTTNS SFDPERVKSY ELGIKADLLD RLLTVNLAGF YSRYRNLQET ATVTSGTVVR
QFVTNAAKSK VKGVELGLTV RPSSNVTLTS NVAYLSSRYA DYPNAPCTTT QQALAPVCVQ
DLSGARRAFA PKLSGNVGMN VTQPLGRYQL SFDANGYFTT RFLQIATGDY RISQEGNVKI
DARIGFGPAD GPWELAVVGK NLTNKLTAGY RQVVPGATGS LAAMADAPRS IGLQGSFHF
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