| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_3087 |
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| Symbol | |
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| ID | 5196985 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | - |
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| Start bp | 3387609 |
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| End bp | 3388400 |
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| Gene Length | 792 bp |
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| Protein Length | 263 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 640582636 |
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| Product | 2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase |
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| Protein accession | YP_001263575 |
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| Protein GI | 148555993 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG3836] 2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase |
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| TIGRFAM ID | [TIGR02311] 2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 0.178883 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACGACT TCAAGACCGC CTTGCTGCAA GACCGCGTCC AGATCGGCCT CTGGCAGGCC
CTAGCCAATC CCTACACGGC GGAGATCTGC GCCGGCGCCG GCTTCGACTG GCTGCTGCTC
GACGGCGAAC ATGCGCCCAA CGACCTGCCG CTGCTGCTCG CCCAGCTCCA GGCGGTCGCG
GCTTATCCGG TCGAGCCGGT GGTCCGCCTT CCGACCGGTG ACGCGGTCCT CGTCAAGCAG
ATGCTCGACA TCGGCGCCCG CAGCCTCCTC GTCCCGATGG TCGAGAGCGC CGCGCAGGCG
GAGGCGATGG TGCGGGCCAC GCGCTATCCG CCGCAGGGGA CGAGGGGCGT GGGATCGGCG
ATCGGCAGGG CCAGCCGATG GAACCGGACG CACAACTACC TGAACGAGGC AGAGGACGAG
ATCTGCCTCA TGGTGCAGAT CGAGAGCGCC GCCGCTCTGG CCGCCCTGCC GTCGATCGCC
GAGCTTCCGG GGGTCGACGG CATCTTCATC GGCCCGTCCG ACCTCGCCGC CTCGCTGGGC
CATCTCGGCG ATCCCGGGCA TGCCGCGGTC CAACGGGCAA TCGAACGGGC GATCGCTACC
GTCCGGACTT CGGCCAAGGC CGTCGGCATT CTCGCCGCGG ACGAAGGACT GGCCCGCCGC
TATCTCGAGC TGGGCGCGAC CTTCGTGGCG GTGGGCACCG ACGTGACCCT GCTGGCCCGC
GGCGCGGAGG CCCTCGCCCG CCGCTTCAAG GGCGGCCGCG ACGAGGAACC TCGCGGAGCA
ACCATCTATT GA
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| Protein sequence | MNDFKTALLQ DRVQIGLWQA LANPYTAEIC AGAGFDWLLL DGEHAPNDLP LLLAQLQAVA
AYPVEPVVRL PTGDAVLVKQ MLDIGARSLL VPMVESAAQA EAMVRATRYP PQGTRGVGSA
IGRASRWNRT HNYLNEAEDE ICLMVQIESA AALAALPSIA ELPGVDGIFI GPSDLAASLG
HLGDPGHAAV QRAIERAIAT VRTSAKAVGI LAADEGLARR YLELGATFVA VGTDVTLLAR
GAEALARRFK GGRDEEPRGA TIY
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