| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_3084 |
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| Symbol | |
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| ID | 5197796 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | - |
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| Start bp | 3384438 |
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| End bp | 3385379 |
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| Gene Length | 942 bp |
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| Protein Length | 313 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 640582633 |
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| Product | 5-oxopent-3-ene-1,2,5-tricarboxylate decarboxylase |
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| Protein accession | YP_001263572 |
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| Protein GI | 148555990 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG0179] 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 36 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGCCTTGCT GTGCACTTTT CAAACGCCGT CCCGGCGGCG ATGCTCCCCA CCGACGCACC
AGGGAGGTCA GCGTGAGGCT TGCCAATTGT CGATTTGAAG GCCGCAGGCG CATCGCGATC
TCGCGCGGGG AAACGGTCGA TCTGCTGCAT GAGCGGGCGA CCGACATCCT GGCGCTGGCG
GCCGATCCGG CCGGCGTCGA GGCCGCCATC GACCGGCGCG GCGTTTCGAT CGAGGCGATC
GCCTTCGACC TGCCCGTCGA GCGTCCCGAC AAGATATTGT GCATCGGCAT CAACTATCGC
GACCACGCCG CCGAAGCGTC GGCAGCGGCC AAGGAGCCCG CGAATCCGTC GATCTTCGTG
CGTTTCCCGG GGTCGCATAG CGGCCACGAA CAGCCGATCG TCGCCCCCGC CATCTCCGAA
CAGTTCGATT TCGAAGGGGA GCTGGGGGTG ATCATCGGCA AGCCCGCCTG GCGGATTTCG
CGGTCGGACG CCTTGTCGCA CGTCGCCGGC TATTGCTGCT TCGCCGAGAA CAGCGTGCGC
GACTTCCAGA AGCACGCGAC GCAGATCACC GCCGGCAAGA ACTTCCGGTC CAGCGGCGCC
TTCGGCCCAT GGCTCACCAC CGCCGACGAG GTCGGGGACC CGTCCCGCCT GACGCTCGTC
ACCCGCTTGA ACGGCGCGGT CATGCAGTCG GCGGCGCTGT CCTCGATGAT TTTCCCGGTC
GATGCGCTGA TCGCCTATAT TTCGCAGTTC ACGCAGCTCC TGCCCGGCGA CGTGATCGCC
ACGGGAACGC CCGCGGGGGT GGGAGCATTG CGGACGCCGC CGGTGTGGAT GAAGCCCGGC
GACCTTCTCG AAATCGACAT CCCCGGCGTC GGCTTGCTGC GCAACCGCGT CGTCGCCGAA
GACGCCATTT TCCCCGAGAT CAACGAAGAG ACCAGATCAT GA
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| Protein sequence | MPCCALFKRR PGGDAPHRRT REVSVRLANC RFEGRRRIAI SRGETVDLLH ERATDILALA
ADPAGVEAAI DRRGVSIEAI AFDLPVERPD KILCIGINYR DHAAEASAAA KEPANPSIFV
RFPGSHSGHE QPIVAPAISE QFDFEGELGV IIGKPAWRIS RSDALSHVAG YCCFAENSVR
DFQKHATQIT AGKNFRSSGA FGPWLTTADE VGDPSRLTLV TRLNGAVMQS AALSSMIFPV
DALIAYISQF TQLLPGDVIA TGTPAGVGAL RTPPVWMKPG DLLEIDIPGV GLLRNRVVAE
DAIFPEINEE TRS
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