| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_3075 |
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| Symbol | |
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| ID | 5198813 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | - |
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| Start bp | 3373232 |
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| End bp | 3375286 |
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| Gene Length | 2055 bp |
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| Protein Length | 684 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 640582624 |
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| Product | 5-oxoprolinase (ATP-hydrolyzing) |
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| Protein accession | YP_001263563 |
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| Protein GI | 148555981 |
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| COG category | [E] Amino acid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG0145] N-methylhydantoinase A/acetone carboxylase, beta subunit |
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| TIGRFAM ID | [TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGTTTTG CGACTGATAC CGGCGGCACT TTCACCGATC TCGTCGTCGA GGACGACGAC
GGGTCGATCA CGCTGCACAA GGCGCCGACC GTCCCCTCCG ACCCCGTGTC CGGCGTGCTC
GACGCGCTGG GCGTCGCGGC CGAGGCGCGC GGCCTTTCGC TGGCCGAGCT GCTCGGCCGG
TCGGACAGCT TCATCCATGG CACCACCCAT GCGATCAACG CCATCATCAC CGGCAATGCC
GCGAAGACGG CGCTGATCGT CACGGCGGGC CATCGCGACA TATTGCTGTT CCGGGAAGGC
GGCCGCACCG AGCCGTTCAA CCACACCATC CCCTATCCCA AGCCTTATGT GCCCCGCGCC
CTGACCTTCG AGGCGCGGGA ACGGGTGCTG GCCGACGGCC GGGTCGTCAC GCCGCTCGAC
GAGGCCGCGC TGGTCGACAC GCTCCACCAG ATCCGCGCCG CCGGGGTGGA GGCGGTCGCG
GTCGCCCTGC TGTGGTCGAC CCTGCACCCG GCGCACGAGC TGCGGATCGG CGCGCTGATC
GAGCTGCATC TGCCCGGTAT GCCCTATACG CTGTCGCATT CGGTGAACGC GACGCTGCGC
GAATTCCGCC GGGCGTCGTC CGCCGCGATC GACGCGTCGC TGAAGCCGCT GATGACGCGC
TACCTGGGCG GGCTGACGCG ACGGCTGGCC GACGCCGGCT TCTCGGGCAA GGTGATGGTG
CTGACCAGCG CCGGCGGCAT GGTCGAGGCA TCCGAGGTCG CGGCGGCGCC GATCCGGGTG
ATCAACAGCG GCCCGTCGAT GGCGCCGGTC GCCGGCAGCC ATTATGCCGA GCGCGAGGGC
GGCTGGCGCA CCGCCATCGT CGCCGATACC GGCGGCACCA CCTACGACAT CAGCCTGGTC
AGCAACGGCC GCATCCCGAT GACGCGCGAC CTGTGGATCG GCCAGCCCTA TCGCGGCCAC
CTCGCCGGCT ATCCCTCGGT CGACGTCAAG AGCGTCGGCG CGGGGGGCGG CAGCATCGCG
CGCGTCGACA GCGCCGGCCT GCTCCATGTC GGCCCCGAGA GCGCCGGATC GACGCCCGGC
CCGGCCTGCT ATGCGCGCGG CGGCGCGCGG CCGACCGTGA CCGATGCCTG CGTGGCGCTG
GGCTATGTCG ATCCGGACTT CTTCCTGGGC GGCAAGATGA AGCTGGACGG GCTGGCGGCG
TGCCGGGCGA TCGCGGAAGG AGTCGCCGGC CCGCTGGGCG TCGGCATCGA GGCGGCGGCG
TGGAGCATCC TCGATCTCGC CACCGAGAAC ATGGTCCAGG CCATCCAGGA ACTGACCGTC
AACCAGGGCA TCGACCCGGC CGAGGCGGTG CTGATCGGCG GCGGCGGGGC CGCCGGTCTC
AACTCGGTGT TCATCGCCCG GCGCCTCGGC TGCAAGCGGC TGCTGATCCC CGAGACGGGC
GCGGCGATGA GCGCGGCCGG CGCGATGATG TCGGATATCG CGACCGAGTT CGCGGCCACC
GCCTACAGCT CCACCGCGGC GTTCGACGCG GCGCGGGTCA ACGCCGCGCT CGACCGGCTG
GGCGAGCAAT GCCGCGCCTT CGCCGACCGC GCCGGGCTCC CCGCCGCCGT CGAATATATC
GCCGAGGCGC GCTATGAAGG CCAGGCATGG GACATCGACG TGCCGCTGCC GGGCAGCCGC
TTCGTCGAGG CCAGCGACGT CGACGCCTTC CGCGCCGCCT TCGACGCGAT GCACGAGCAG
ATCTTCACCA TCCGCGACGA CGCTTCGGCG GTCGAGCTGG TCGGCCTGCG CGCGCGGGTC
CGCTGCCGCG CGCGGGGCGA CGGCGCCTTT CGCCTGCGGG CCGAAGCCGG GGCCGGCCAG
GCGGCGGCGG CGCGGCCGGT CTATTTCGAC GGCTTCGGCA GTCTCGACAC GCCGGTGCTG
CGCTGGGACG CGATCCCCGC GGATCGCGAT TTCGCGGGGC CGGCGCTGAT CGAATCCCCC
TTCACCACCG TCGTCATCGA CCCGCCGGCC CGTTTCCGCC GGTCGTCCGA TGGCGCGCTT
CTGATCGAGG CTTGA
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| Protein sequence | MRFATDTGGT FTDLVVEDDD GSITLHKAPT VPSDPVSGVL DALGVAAEAR GLSLAELLGR
SDSFIHGTTH AINAIITGNA AKTALIVTAG HRDILLFREG GRTEPFNHTI PYPKPYVPRA
LTFEARERVL ADGRVVTPLD EAALVDTLHQ IRAAGVEAVA VALLWSTLHP AHELRIGALI
ELHLPGMPYT LSHSVNATLR EFRRASSAAI DASLKPLMTR YLGGLTRRLA DAGFSGKVMV
LTSAGGMVEA SEVAAAPIRV INSGPSMAPV AGSHYAEREG GWRTAIVADT GGTTYDISLV
SNGRIPMTRD LWIGQPYRGH LAGYPSVDVK SVGAGGGSIA RVDSAGLLHV GPESAGSTPG
PACYARGGAR PTVTDACVAL GYVDPDFFLG GKMKLDGLAA CRAIAEGVAG PLGVGIEAAA
WSILDLATEN MVQAIQELTV NQGIDPAEAV LIGGGGAAGL NSVFIARRLG CKRLLIPETG
AAMSAAGAMM SDIATEFAAT AYSSTAAFDA ARVNAALDRL GEQCRAFADR AGLPAAVEYI
AEARYEGQAW DIDVPLPGSR FVEASDVDAF RAAFDAMHEQ IFTIRDDASA VELVGLRARV
RCRARGDGAF RLRAEAGAGQ AAAARPVYFD GFGSLDTPVL RWDAIPADRD FAGPALIESP
FTTVVIDPPA RFRRSSDGAL LIEA
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