| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_3060 |
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| Symbol | |
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| ID | 5198610 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | + |
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| Start bp | 3357651 |
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| End bp | 3358334 |
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| Gene Length | 684 bp |
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| Protein Length | 227 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 640582609 |
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| Product | fumarylacetoacetate (FAA) hydrolase |
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| Protein accession | YP_001263548 |
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| Protein GI | 148555966 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG0179] 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 40 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.021682 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | GTGTATGTAG TCGAACCCTC CCCGACCGTC GCCGTGCCGG TCACGACCGG CGGCGAATTC
CCGGTCCGCC GGATCTATTG CGTCGGCCGC AACTATCGCG CCCACGCGAT CGAGATGGGC
GCGGACCCCG ATCGCGAGGC ACCCTTCTTC TTCACCAAGC CGTCCGATGC GATCGTCGCC
AATGGCGCGA CCATCCCCTA TCCCGCGCGT ACCGAGGACT ATCAGCATGA GATCGAGCTG
GTCGTCGCGA TCGGCAAGGC GGGCGCCGCG ATCGCCGTCG GCCAGGCGCT CGACCATGTC
TTCGGCTATG CCGTCGGGCT CGACATGACC CGGCGGGACC TGCAGATGAT CGCGCGCAAC
GCTGGCCGTC CGTGGGACAT GGGCAAGGCG TTCGACCATT CCGCTCCCTG CGCGGCGATC
TCGCCTGTCG GTCAGGTCGG CCATCTGGCG AACGGCGCGA TCTCGCTCGA GATCAACGGC
GAGGTGCGTC AGGCGAGCGA TGTCTCGCTG CTGATCTGGA ACGTCGCCGA GACGATCGCG
GACCTGTCCA CCTATGTCGC CTTGCAGCCC GGCGACCTGA TCTACACCGG GACGCCAGAG
GGCGTGGGCC CGGTCCGGCG CGGCGATCAT CTGGTCGGCA AGGTGGCGGG GCTGACCGAT
CTGGTCGTCG ACATCGCGCG ATGA
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| Protein sequence | MYVVEPSPTV AVPVTTGGEF PVRRIYCVGR NYRAHAIEMG ADPDREAPFF FTKPSDAIVA
NGATIPYPAR TEDYQHEIEL VVAIGKAGAA IAVGQALDHV FGYAVGLDMT RRDLQMIARN
AGRPWDMGKA FDHSAPCAAI SPVGQVGHLA NGAISLEING EVRQASDVSL LIWNVAETIA
DLSTYVALQP GDLIYTGTPE GVGPVRRGDH LVGKVAGLTD LVVDIAR
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