| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_3059 |
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| Symbol | |
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| ID | 5198609 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | + |
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| Start bp | 3356580 |
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| End bp | 3357629 |
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| Gene Length | 1050 bp |
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| Protein Length | 349 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 640582608 |
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| Product | gentisate 1,2-dioxygenase |
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| Protein accession | YP_001263547 |
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| Protein GI | 148555965 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG3435] Gentisate 1,2-dioxygenase |
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| TIGRFAM ID | [TIGR02272] gentisate 1,2-dioxygenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 34 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.0227445 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAAGCAG AAACGGCCCC CGAAACCATG GCGGCCTTCT ACGCGGAGCT CGACGGCCAG
AACATGGCGC CGCTGTGGGA AAGCCTGCAC AGTCTGGTGC CGCGCCAGCC GGCGCCGGTC
ATCCAGGCCG CCCATTGGGA CTATGACGCC GTCGTCCGCC CGCGCCTGAT GGAGGCGGGC
CGGCTGATCA CCGCGAAGAA GGCCGAGCGC CGCGTGCTCA TCCTCGAAAA TCCGGGGCTG
CGCGGCAAGG CCTCGATCAC CCAGTCGCTC TATGCCGGGT TGCAGCTCAT CCTGCCGGGC
GAGGTCGCGC CGGCGCATCG GCACACCCAA TGCGCGCTGC GTTTCATCGT CGAGGGGGAG
GGCGCGCACA CCACCGTGTC GGGCGAGCGT ACGATCATGC ATCCCGGCGA CTTCGTGCTG
ACGCCGAACT GGACCTGGCA CGACCATGGC AATGAGAGCG ACGCGCCGAT GGTGTGGCTC
GACGGGCTCG ACATTCCGAT CGTCGCCTTC CTCGACGCCG GTTTCGCCGA GGCCGGCAAT
GCCGACAGCC AGCCAACCGT TCGCCCCGAC GGCGACGCGG AGGCGCGGTT CGGGGGCACG
CTGCTGCCCG TGGACTGGCG GGCGTCGTCG CGGAACTCGC CGGTGCTCAA CTATCCCTAT
GCGCGGTCGC GGGAGACGCT GCACCGGCTG GAACGCAACG GCGAGGCCGA CGCCAGCCAC
GGATACAAGC TGCGCTACGT CAATCCGGCC GACGGCGGCT GGCCGATGCC GACGATCGGC
GCGTTCATCC AGTTCCTGCC GGGCGGTTTT CGCACCGCGC CCTACCGGTC GACCGACAGC
ACCGTCTATG CGGTGGTCGA GGGGCATGGC GAAAGCATCG TCGGCGATCG GCGCATCCGC
TGGAAACCGC GCGACATCTT CGTCGCGCCG AGCTGGCAAT GGCAGGAGCA TGCCGCGAGC
GGCGACGCGG TGCTGTTCAG TTTCTCCGAC CGTCCCGTTC AGGAGGGTCT CGGCCTGTGG
CGCGAAGAAC GGGGCATTCC CCGCCGCTGA
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| Protein sequence | MEAETAPETM AAFYAELDGQ NMAPLWESLH SLVPRQPAPV IQAAHWDYDA VVRPRLMEAG
RLITAKKAER RVLILENPGL RGKASITQSL YAGLQLILPG EVAPAHRHTQ CALRFIVEGE
GAHTTVSGER TIMHPGDFVL TPNWTWHDHG NESDAPMVWL DGLDIPIVAF LDAGFAEAGN
ADSQPTVRPD GDAEARFGGT LLPVDWRASS RNSPVLNYPY ARSRETLHRL ERNGEADASH
GYKLRYVNPA DGGWPMPTIG AFIQFLPGGF RTAPYRSTDS TVYAVVEGHG ESIVGDRRIR
WKPRDIFVAP SWQWQEHAAS GDAVLFSFSD RPVQEGLGLW REERGIPRR
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