| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_3056 |
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| Symbol | |
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| ID | 5198606 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | + |
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| Start bp | 3354158 |
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| End bp | 3355420 |
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| Gene Length | 1263 bp |
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| Protein Length | 420 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 640582605 |
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| Product | Rieske (2Fe-2S) domain-containing protein |
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| Protein accession | YP_001263544 |
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| Protein GI | 148555962 |
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| COG category | [P] Inorganic ion transport and metabolism
[R] General function prediction only |
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| COG ID | [COG4638] Phenylpropionate dioxygenase and related ring-hydroxylating dioxygenases, large terminal subunit |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 0.937037 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.0275493 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATGTTG CGACTTCGAT CGCCCCGGAC GCGGCGGCGG CGTTCGACGG GATCTGGCCG
GACGACGGCT CCAGCCGCAT CCCGGCGCGG GTCTATACCG ATCCGGCCGT CTATCGGCGC
GAGCTGGATC GCTTCTTCTA CGGCCGACAC TGGAGCTATG TCGGTCTCGA GGCGGAGGTG
CCCGAGCCGG GCCGGTTCAA GCGTACCGCA ATCGGCGAGC GATCGGTCAT CATGATCCGC
AACCGTCAGG GTGAGATCAA CGTGCTCGAG AATCGCTGCG CCCACCGGGC GATGCGCTTC
TGCCAGGAGA AATTCGGCAA GGTGAAGACG CTGGTGTGCC CCTATCACCA GTGGAACTAC
AACCATGACG GCAAGCTGCT AGGGGTCCCG TTCCAGCGGG GCGTGAAGGG CAAGGGCGGA
ATGCCCGAGG ATTTCGCGCT GACCGATCGC AGCCTCCGCC GGCTCAAGGT GACGGTGCGC
AACGGCGTGG TGTTCGCGTC GTTCGACGAT GATGTCGAGC CGTTCGAGGA CTATCTCGGC
CCCGACGTGC TGCGCTATTT CGACCGCACC TTCGACGGGC GCGAACTGGT GGTCCAGGGT
TATTCGCGCC AGCGCATTCC GGGCAACTGG AAGCTGATGA TGGAGAACAT CAAGGACCCC
TATCATCCCG GGCTGCTGCA CACCTGGTTC GTGACCTACG GGCTGTGGCG CGCGGACAAC
CAGTCGCAGC TCGTCATGGA CCGGCATCAC CGCCATGCCT GCATGATCTC GAAGCGCAGC
GAGACGGTCG ACGCCGAGGT CACCAAGGGT GTCACCAGTT TCCGCAAGAA CATGCAGCTC
AACGACGAGA GCCTGCTCGA CATCGTCGCC GAGCCCTGGT GGGGCGGTCC CACCGTCTGC
ATGACCACGA TCTTCCCCAG CGTGATCCTG CAGCAGCAGA TCAACTCGCT GTCGACGCGG
CAGATCATCC CGGTCGGGCC CGACGCGTTC GATTTCGTCT GGACGCACTT CGCCTTCGAC
GACGACGACG AGGGGATGAG GGCGCGCCGG ATGCACCAGG CGAACCTGTT CGGCCCGGGC
GGCCTCGTCT CGGCCGACGA CGGCGAGGTG ATCGAGTTCA GCCAGGACGG TTTCGAGCAG
GACCAGGGTT TCGCGACGCT GTGCGAACTG GGCGGAACCG ATGTCGGCAA CAGCGACCAC
ATGGTCACCG AGGGGCTGAT CCGCGGCATG TACCGCTATT GGCGCGAGGT GATGGAGATA
TGA
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| Protein sequence | MNVATSIAPD AAAAFDGIWP DDGSSRIPAR VYTDPAVYRR ELDRFFYGRH WSYVGLEAEV
PEPGRFKRTA IGERSVIMIR NRQGEINVLE NRCAHRAMRF CQEKFGKVKT LVCPYHQWNY
NHDGKLLGVP FQRGVKGKGG MPEDFALTDR SLRRLKVTVR NGVVFASFDD DVEPFEDYLG
PDVLRYFDRT FDGRELVVQG YSRQRIPGNW KLMMENIKDP YHPGLLHTWF VTYGLWRADN
QSQLVMDRHH RHACMISKRS ETVDAEVTKG VTSFRKNMQL NDESLLDIVA EPWWGGPTVC
MTTIFPSVIL QQQINSLSTR QIIPVGPDAF DFVWTHFAFD DDDEGMRARR MHQANLFGPG
GLVSADDGEV IEFSQDGFEQ DQGFATLCEL GGTDVGNSDH MVTEGLIRGM YRYWREVMEI
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