| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_3044 |
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| Symbol | |
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| ID | 5198672 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | - |
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| Start bp | 3339647 |
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| End bp | 3341974 |
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| Gene Length | 2328 bp |
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| Protein Length | 775 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 640582593 |
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| Product | TonB-dependent receptor |
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| Protein accession | YP_001263532 |
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| Protein GI | 148555950 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.000000000826445 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 0 |
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| Fosmid unclonability p-value | 0.00000113602 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | unclonable |
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Sequence |
| Gene sequence | ATGAGAAACC GGAACTGCAA TCACGCAAAA TCGCTGCTCC TGCTGCTTTC CATCGGCATA
TCCCATAGCG CCTGGGCTCA GGCCGAAACG GCCGAAGGCG CCAATTCGAC AGATATCGTT
GTAACGGCGC AAAGGCGCGC CGAGCGCCTG CAGGACGTCC CGGTGTCGGT CGGCGTCGTC
TCGGGCGACA GGCTGGCCCG GACGAACACG CGCAATCTCG AGGAACTCAG CAGCCAGCAG
CCGGCGCTCA AGATCGCGAC CGGCGCCGCG TCCGACCAGC TCAACCTCCG CGGTGTCGGA
TCGGGCTTCA ACGCCGGCTT CGAGCAATCG GTCGCGACCT TCGTCGACGG CGTCTATCGC
AGCCGCGCCC GGACCTCGCG CCTCGCGCTG TTCGACATCG ACCGGGTCGA GATATTGAAG
GGTCCCCAGA CGATCTTCTT CGGCGCGAAC GCGATCGCCG GCGCGCTCAA CATCACGACG
CGCAAGCCGA GCGACGAACT GACCGTCAAC GCCTCGGCGC TCTATGCGCC GACCGACGGC
GAATATGCGC TGGAAGGCGG AATTTCGGGA CCGCTGATGG ATACCCTGAA GGCCCGCGTC
GCGGTCAAGG CGTCGGGCAT GAACGGCTAT GTCCACAACG ACCGCCTCGA CAACAAGGGG
CCGCATCTCC GCGACCTGCA GGGACGCGTC CAGTTCCAGT GGGACCCGTC GAGCAACCTG
TCGATGACGC TGCGCTATGA CGGCGCCCGG CTCCGCGACA CGGGAACCTC CAACACCGAG
ATAATAGCAT GTCCCCCTGT CGGTTCGGCG CCGACCGGTC TCTGCGCGCG GGCGCTGGGC
CAGTTCGGAA CGATCGACGA CCGGTTCGAC TATCACAGCA ACGCCGCGGC CAACCGGGCG
CGGATCGACT TCCACGAGAT CGGACTGACC ACGCGGCTGC AGCTCGGCGA CTATTCGCTC
AACCTGATCA GCGGCTACCA GCACCAGCGC GCCGACGTGA TCCCCTATAA TGTCAGCTTC
CCCGGGCTGA GCCCGGTCGG CACCCAGAGC TTCCAATGGG CGCTGCTGGG CGAACGATCG
AAGGTCTTCA GCCAGGAGAT CCGGCTCGAA TCGCCCGGCG ACAGGCCCGT CGCCTTCCAG
GTCGGCGGCT ATTTCGACCA TATGGACCTC GATCTCGCCA CCAAATTCGG CTTCTTCGGA
TCGGCGGCGG GCGCCCTCGC GGCCCCCTAT CTCAACGCCC AGTCGCTGGT CGGCAGCGAT
GCCTATGCGC AGCAGAAGAG CTCGACGCTG TCCGGTTTCG GCGCGGTGGT GGCGAAGCCA
GTCGACGGCC TGCGCCTCTC GGGCGGGCTC CGCTATTCGC GGATCGAGAA GAAGGCGCAT
CGCCAGGCGG TGATCGGCAC GCGCGGGGCC GAGCCCGATC ATGAGCCGCT GACCCCCGCG
CCGCTCGCCG CGCAATTGCT GCTCGCCGGT CCCACCGGCA CCGCGCTTGG CGACTATCCG
ATCACCCGCC GCGTCGACAC GATGTTCATG CCGTCGGCGA GCGTCCAATA TGACCTCGTC
CGCGATGTCA TGGTCTATGC GAGCTACGCC AAGGGCTTCA AGGCGGGCGG CTTCGGCGCC
AACACGGCCG ACATCTTCGG ACCGGAAAAG GTCGACGCGT TCGAGCTGGG CCTGAAATCG
CAATGGTTCG GCCGCCGGCT GACGACGAAC ATCGCCCTGT TCGACAGCAA ATATCGCGAC
CTTCAGGAAA CGAGCACCGT CACCACGTCG GCCGGCGGCC TGATATCGGT CGTCAACAAC
GCCGCGAGCA TGCGCTCGCG CGGTATCGAG CTAGAGACCA GGGCGATCGT CTCGCGCGGG
CTGACGCTGT GGAGCAACGT CAGCTATCTC GACGCCCATT ATCAGAAATT CACCAACGCT
CCGTGCACGC CGAACCAGCG CGCCGTCACG CCGGCCTGCA TCCAGGACCT GTCGGGCCAG
CGTCGCGCCT TCGCCCCCTC GTGGAGCGGT TCGGTCGGCG CCGACGTCGA ACAGCCGGTG
ACCGACGACC TCCTGCTGCG GCTAGGCGCC AGCCTCTATT TCACGACCGG CTATTTCCTG
CAGGCCAATC ATGATCCCTT GTCCTACCAG CCGGGCTATC AGAAGCTCGA CCTGCGGGCG
GCGATCGGGC CGCGCGATGG CCGCTGGGAG GTCGCCGTGA TCGCCAAGAA CGTCAACGAC
GCCAAGACGG CAAGCTTCCG CGTCACCACG CCGGGCACCG TTGGCACCGG AACGCTGCTG
CCCGATCGGC CCCGATCGGT CGCCTTCCAA GTGAGCACCA AATGGTGA
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| Protein sequence | MRNRNCNHAK SLLLLLSIGI SHSAWAQAET AEGANSTDIV VTAQRRAERL QDVPVSVGVV
SGDRLARTNT RNLEELSSQQ PALKIATGAA SDQLNLRGVG SGFNAGFEQS VATFVDGVYR
SRARTSRLAL FDIDRVEILK GPQTIFFGAN AIAGALNITT RKPSDELTVN ASALYAPTDG
EYALEGGISG PLMDTLKARV AVKASGMNGY VHNDRLDNKG PHLRDLQGRV QFQWDPSSNL
SMTLRYDGAR LRDTGTSNTE IIACPPVGSA PTGLCARALG QFGTIDDRFD YHSNAAANRA
RIDFHEIGLT TRLQLGDYSL NLISGYQHQR ADVIPYNVSF PGLSPVGTQS FQWALLGERS
KVFSQEIRLE SPGDRPVAFQ VGGYFDHMDL DLATKFGFFG SAAGALAAPY LNAQSLVGSD
AYAQQKSSTL SGFGAVVAKP VDGLRLSGGL RYSRIEKKAH RQAVIGTRGA EPDHEPLTPA
PLAAQLLLAG PTGTALGDYP ITRRVDTMFM PSASVQYDLV RDVMVYASYA KGFKAGGFGA
NTADIFGPEK VDAFELGLKS QWFGRRLTTN IALFDSKYRD LQETSTVTTS AGGLISVVNN
AASMRSRGIE LETRAIVSRG LTLWSNVSYL DAHYQKFTNA PCTPNQRAVT PACIQDLSGQ
RRAFAPSWSG SVGADVEQPV TDDLLLRLGA SLYFTTGYFL QANHDPLSYQ PGYQKLDLRA
AIGPRDGRWE VAVIAKNVND AKTASFRVTT PGTVGTGTLL PDRPRSVAFQ VSTKW
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