Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swit_3042 |
Symbol | |
ID | 5198670 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sphingomonas wittichii RW1 |
Kingdom | Bacteria |
Replicon accession | NC_009511 |
Strand | - |
Start bp | 3337416 |
End bp | 3337940 |
Gene Length | 525 bp |
Protein Length | 174 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 640582591 |
Product | MarR family transcriptional regulator |
Protein accession | YP_001263530 |
Protein GI | 148555948 |
COG category | [K] Transcription |
COG ID | [COG1846] Transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 0.125227 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 4 |
Fosmid unclonability p-value | 0.00142823 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | GTGAGTTTCC TTCCCCGCTG GCAAAGATCG GCTGTGTCCA CCCCCGCCCG CTCCCCTGCC GCCGATCGCG CCAAGCAGCT CGAGGCCCTG TACCAGCGGC CGGGCTTCCT GCTGCGCCGC GCCCATCAGA TCGCCGTGTC GCTGTTCACG GAGGAAAGCG CCGCGTTCAA CATCACGACC ACGCAATATG GCGTGCTGGT GATCCTGCGC GTCTATGACG ATCTCGATCA GATCGGGGTG TCGAAGAAGG TCGGGCTCGA CCGCTCGACG ACGGGGCTGG TGATCCAGAA ACTCGAACGC GAACGCCTCG TCGTCCGCCT CGCCGATCCC GCCGATGGCC GCCGCAAGAT CATCGTCCTG ACGGCCAAGG GCGAGCGCCT GCTGAAGGAC CTGCAAGAGC CGGCCGCCCG CGCGCAGGAG ATCGCCCTGT CGCCCTTCGA GCCGGAGGAG GCCGAGCAGT TCCTCCGCCT GCTCGACAAG TTCGTCACCC ACTTCAACGA AAAGACGCGC GCGCCACTGC TCTGA
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Protein sequence | MSFLPRWQRS AVSTPARSPA ADRAKQLEAL YQRPGFLLRR AHQIAVSLFT EESAAFNITT TQYGVLVILR VYDDLDQIGV SKKVGLDRST TGLVIQKLER ERLVVRLADP ADGRRKIIVL TAKGERLLKD LQEPAARAQE IALSPFEPEE AEQFLRLLDK FVTHFNEKTR APLL
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