Gene Swit_3036 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwit_3036 
Symbol 
ID5198273 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingomonas wittichii RW1 
KingdomBacteria 
Replicon accessionNC_009511 
Strand
Start bp3327724 
End bp3329190 
Gene Length1467 bp 
Protein Length488 aa 
Translation table11 
GC content66% 
IMG OID640582585 
Productaldehyde dehydrogenase 
Protein accessionYP_001263524 
Protein GI148555942 
COG category[C] Energy production and conversion 
COG ID[COG1012] NAD-dependent aldehyde dehydrogenases 
TIGRFAM ID[TIGR01780] succinate-semialdehyde dehydrogenase 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGGCG CGACGATGCT GGATCGGGAT GCGCGACCGG CCGACCACGC CGCCTTTCTC 
GGCGGAAGCT GGGAGCAGGC CGATGATGGC CGTACCATGG CCGTCATCGA CCCTGCGGAC
GGCTCCACGG TCGGCACCGT GCCCTATATG GGCGCTACCG AAACGCGGCG CGCGGTCGAG
GCGGCGCATG CGGCCTTTCC CGGCTGGAGC GCGCGATCCG GGCGCGATCG GGCGCGGATC
ATGCGCAGGA TGTTCGATCT GATCATCGAC CGTCAGGATG AGCTGGCCCT GTTGCTGACC
CGCGAGCAGG GGAAGCCCCT TGGCCAGGCG CGGGGCGAGG TCGTCTATGG GGCGTCCTAT
CTCGAATGGT ATGCCGAGGA AGCGCCGCGC ATCCGTGGCG ACATCATGAG CGGTGCCCAC
GACGACAAGA CGATCACCAT CTTGCGCCAG CCGATCGGCA CGACGGCGGC GATCACGCCC
TGGAATTTCC CCTTCGTCAG CGTGACGCGC AAGCTCGCCC CGGCTCTGGC GGCCGGCTGC
ACCCAGATAT TGAAGCCGGC GCCGACGACG CCACTCGTGG CTCTCGCATT GGCAGGGATC
GCTCAGGAAG CGGGGCTTCC CGATGGCGTC TTCAACGTGC TGACCGGTGA CGACGCGGCG
ATCGGCGGCG CGCTGACGGA AAGCCGCGAC ATCAGGCTGC TGTCCTTCAC CGGTTCGACG
GCAATCGGCA AGCTGCTCTA CCGGCAATGC GCCGACACGG TGAAGAAGCT CTCGCTCGAG
CTTGGCGGTC ATGCACCCTT CATCGTCTTC GACGATGCCG ACATCGATGC GGCCGTCGAA
GGGCTCATCG CCTGCAAGCT CCGCAATATG GGGCAAGTCT GCATCGCCGC GAACCGGATC
TTCGTCCATG ACCGCGTGTA CGATCGTTTT GCCGACCAGC TCGTCGTCCG TGTCGACGCG
ATGACGATGG GACCGGGCGT CGACGATCTC GACCAGGGTC CGCTCGCCAA CCGCGCGGTG
TTTGACAAGG TCGCGCGCCA TGTCGTCGAT GCGGTCGAAG GTGGAGCACA TGTGCTTGCC
GGTGGCGGCC CGGATGCGCG GGGCGGCCTT TTCTTTCGGC CGACGGTGCT GGCCGATGTG
GCGGACAACG CACTGCTGAA CTGCGAAGAG ACATTCGGGC CGGTGATCGC CCTGTCGCGC
TTCTCGGACG AGGATGAGGT GATTGCCCGC GCCAACGACA CACCCTTCGG GCTCGCGGGC
TATTTCTACA GCCGGGACCA TGGCCGCGTC ATGCGCGTCG CCGGGGCGCT CGAGTGCGGG
ATCATCGGCG CCAATATCGG CGTCGTTGCT TCGGCCGCAG GCCCCTTTGG CGGGATCAAG
GAATCGGGTC TCGGCCGCGA AGGGGCGCTC AGCGGGTTGG AGGAGTTTCT CGAACAGAAA
TATCTGTGCT CGCCGCGTCG GCTCTGA
 
Protein sequence
MSGATMLDRD ARPADHAAFL GGSWEQADDG RTMAVIDPAD GSTVGTVPYM GATETRRAVE 
AAHAAFPGWS ARSGRDRARI MRRMFDLIID RQDELALLLT REQGKPLGQA RGEVVYGASY
LEWYAEEAPR IRGDIMSGAH DDKTITILRQ PIGTTAAITP WNFPFVSVTR KLAPALAAGC
TQILKPAPTT PLVALALAGI AQEAGLPDGV FNVLTGDDAA IGGALTESRD IRLLSFTGST
AIGKLLYRQC ADTVKKLSLE LGGHAPFIVF DDADIDAAVE GLIACKLRNM GQVCIAANRI
FVHDRVYDRF ADQLVVRVDA MTMGPGVDDL DQGPLANRAV FDKVARHVVD AVEGGAHVLA
GGGPDARGGL FFRPTVLADV ADNALLNCEE TFGPVIALSR FSDEDEVIAR ANDTPFGLAG
YFYSRDHGRV MRVAGALECG IIGANIGVVA SAAGPFGGIK ESGLGREGAL SGLEEFLEQK
YLCSPRRL