| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_3027 |
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| Symbol | |
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| ID | 5196505 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | - |
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| Start bp | 3312983 |
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| End bp | 3315538 |
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| Gene Length | 2556 bp |
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| Protein Length | 851 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 640582576 |
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| Product | TonB-dependent receptor |
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| Protein accession | YP_001263515 |
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| Protein GI | 148555933 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATCAACC GGAAGATCCG TTTGCTGCTG GTCTGTTCCG TAGCGGCCAT TTTTGCGCCC
GGCGTGGCTG CGCAGAACGC CGAAGCCGAT GCGGTGGGTG GCGGCTCCGG CCTGGACGAA
ATCGTCGTCA CCGCGCAGAA GCGCGCGGAA AATGTTCAGG ATGTGCCGAT CGCTATCGCC
GCGTTCGGCG GCGAGGCCAT CCAGCAGCGC GGCATCTCCG ATGTTTCCCA GCTCAGCTCG
ATCACGCCGA GCGTGGTGCT CGATGCCGGC ACGCCGTTCG CCGGCTCGGG CGCGGCGCTG
GGTGCGACGA TCCGCGGCAT TGGCCAGAAC GATTTCGCGG TCAATGTCGA TCCGGGCGTG
GGCGTCTATC TCGACGGCAT CTATCTCGCC CGGACGGTCG GCGCCAACGT CGCCCTGCCC
GACGTCGAGC GGGTCGAGGT GCTGAAAGGG CCGCAAGGCA CCCTGTTCGG GCGCAACACG
ATCGGCGGCG CGATCAACAT CGTCACCCAT GAGCCGGGCG ACGAGTTCCG CTTCAAGGGC
TCGGTGACGA CCGGCCGCTT CGAGCGTCTC GACGTCGCCG GCACGGCGGA CATTCCGCTG
TCGGAGACGC TGAAGTCGTC GATCACCTTC GCCAGCAACC ATCGCGACGG CTTCGTCAAG
CGCGTACCCT ACACCCAGGC GGGCCCCTAT GTGCAGGAAC CGAACACGCT GTACCGCGAG
GTCGGCTACG ACAGCTCCAG CCGCGAAGGT GGCGTCGGCG ACTGGTCGCT ACGCGGCAAG
CTGAAATGGG AGGCGTCCTC CAGCCTCAAG GTCACCGTCA CCGGCGACTA TTACAAGCAG
AACACCTCCG GCCTGCCGAA CATCGTCCTC GACGTGCTCG ACGATTATCC GGGCGACTTC
GCGGGGCCGG GCGCGCCGTT GGTGCCGGGT TCGGCGCTGA CCCCGGGCAC GGGCTACAAC
TTCGCCGGCC TCTATAATTT CTGCATCAAT TCAACTCCGG CCCAGATCAT GGGGCGCAAC
GCGCAGTCGA TCTGCGGCCC GCGCGGCAAC GAGCTCAATC CCTCGACGAT CCTGCCGGCG
CTGGGCAGCG CAAATGTCGA TGCCGATCCT AGCAACAACC GGCTGCCCTA TGACGATCGC
TGGGTCAGCA CGAACTGGAA CCGCAGCTAC GCCACCGGCA ACAGCTTCGC GCGGTCCAAG
ACCTGGGGCT TCTCCGGCGC GCTGGACTGG AGCCTGTCGC CCGACATCAC GCTGCGGTCG
ATCACCGGCT ATCGCGAGAT GGAATGGGCG TCGGGCTTCG ACGGCGACAA TTCGCCGATC
AACTTCCTCC ATGTCTCGAA CTCGGCCAAG CAGCATCAGT TCAGCCAGGA ATTCCAGCTC
GTAGGCGACA CCGACAAGCT GGGCGGCAAG CTCAACTATG TGCTCGGCGC CTATTATTTC
AGCGAGAAGG GGAGCGAGGA CGGCTTCGTC ACGATCGGGA CCGGGCTCCT CCAGATCGAA
GGGCCGATCG ACGTCAAGAA CCGGAACGTC TCCTTCTTCG GCCAGCTCGA CTGGCGGGTG
AGCGACCTGC TGGGGTTCAC GCTGGGCGGG CGCTATACGT CGGAGAAGAA GGCGTTCGAC
GCGCGGCAGA CCGACTATGC CGGGTTCAGC TATGACCTGT TCAACTGTCC GGTGACGGTG
GCGATCTGCC CCGGCATCCT CGGTTTCCCC GATCCGAACG ATCCGCTGCG GGTCTATCCG
CCCAACACGC CGGACCGCAA ATTCCACAAT TTCTCCCCGA AATTCGGCGT GCAGCTCCAT
CCCGACGACG ATGTGATGGT CTATGGTTCC TACACCATGG GCTATAAGGT CGGCGGCTGG
AGCACCCGGT TGCAGAATCC CACCGCGACC GCGCCGACCT TCGACGACGA GAAGGCGAAG
ACGCTCGAGC TCGGCTTGAA GTCGACGCTG CTCGACCGGC GGCTGCGGTT CAACGCCGCA
GTGTTCAGGA CGATCTACGA CAACATCCAG CTCCTCTTCC AGCGCGGCAC CAACCCGCTG
ATCGAGAATG CCGGCAAGGC CACGATCAAG GGCGCCGAGG CCGACCTGAC CGCATCGATC
AACGACTATC TGAGCCTGAC GATGTCGGCC GGCTATCTCG ACGCCAAGCT GACCGAGGTG
ATCGGCCCGA CCGGCCCCGA CAGCGTCCAG CTCGGCACGA GCGTCGGCGC GCGGCTGCCG
AAGGTGCCGA AGTTCACCTT CAACCTCTCG CCGCGCGTCA CCTTGCCGGT CGGCGCGGGC
GACGCGAAGC TGGTCTTCCA GGGCGACTAT ACCCACACCT CCTCGATGTG GAACGACGCC
CAGCGGACCT TCCTGCTCAA GCGCCCGACC ACCGACGTCT TTAACGCCAG CCTGACTTTC
CGGAGCGGCC GCAACTGGTC GGTGACGCTC GGCGGGACCA ATTTGAGCAA CGAGCGCTAT
GTCGTGAACG GCGTTGCCCA GAAGGCCGGC GGTCTGGTCT ATGGTTCGCC AAATCGTCCG
CGCGAATGGT ACGCCCGGCT GGGCGTGGAA TTCTAA
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| Protein sequence | MINRKIRLLL VCSVAAIFAP GVAAQNAEAD AVGGGSGLDE IVVTAQKRAE NVQDVPIAIA
AFGGEAIQQR GISDVSQLSS ITPSVVLDAG TPFAGSGAAL GATIRGIGQN DFAVNVDPGV
GVYLDGIYLA RTVGANVALP DVERVEVLKG PQGTLFGRNT IGGAINIVTH EPGDEFRFKG
SVTTGRFERL DVAGTADIPL SETLKSSITF ASNHRDGFVK RVPYTQAGPY VQEPNTLYRE
VGYDSSSREG GVGDWSLRGK LKWEASSSLK VTVTGDYYKQ NTSGLPNIVL DVLDDYPGDF
AGPGAPLVPG SALTPGTGYN FAGLYNFCIN STPAQIMGRN AQSICGPRGN ELNPSTILPA
LGSANVDADP SNNRLPYDDR WVSTNWNRSY ATGNSFARSK TWGFSGALDW SLSPDITLRS
ITGYREMEWA SGFDGDNSPI NFLHVSNSAK QHQFSQEFQL VGDTDKLGGK LNYVLGAYYF
SEKGSEDGFV TIGTGLLQIE GPIDVKNRNV SFFGQLDWRV SDLLGFTLGG RYTSEKKAFD
ARQTDYAGFS YDLFNCPVTV AICPGILGFP DPNDPLRVYP PNTPDRKFHN FSPKFGVQLH
PDDDVMVYGS YTMGYKVGGW STRLQNPTAT APTFDDEKAK TLELGLKSTL LDRRLRFNAA
VFRTIYDNIQ LLFQRGTNPL IENAGKATIK GAEADLTASI NDYLSLTMSA GYLDAKLTEV
IGPTGPDSVQ LGTSVGARLP KVPKFTFNLS PRVTLPVGAG DAKLVFQGDY THTSSMWNDA
QRTFLLKRPT TDVFNASLTF RSGRNWSVTL GGTNLSNERY VVNGVAQKAG GLVYGSPNRP
REWYARLGVE F
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