| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_3001 |
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| Symbol | |
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| ID | 5196888 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | + |
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| Start bp | 3287761 |
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| End bp | 3289401 |
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| Gene Length | 1641 bp |
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| Protein Length | 546 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 640582550 |
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| Product | beta-lactamase domain-containing protein |
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| Protein accession | YP_001263490 |
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| Protein GI | 148555908 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0595] Predicted hydrolase of the metallo-beta-lactamase superfamily |
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| TIGRFAM ID | [TIGR00649] conserved hypothetical protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGACGACTC CCGGTAATGA ACTGCTCTTC CTGGCGCTTG GCGGCTCCGG GGAGATCGGC
ATGAACGTCA ATCTCTACGG CACCCAGGGC AAATGGGTGA TGGTCGACCT CGGCCTCACC
TTCGCCGATC CCGGCTATCC GGGGGTCGAG CTGATCCTGC CCGACCTCGC CTTCATCGAG
GAGCGCGCCG ACGACCTGCT CGGCGTCGTG CTGACCCATG GGCATGAGGA CCATATCGGC
GCGATCCCCT ATCTCGCCGC CGACCTCGGC GTGCCGCTCT ACGCGACGCG CTTCACCGCC
GAGCTGATCA AGGGCAAGCT CGACGAGGAA GGGCTGACCG GCAAGGTCGA CCTCCATGTG
ATCGAGAATG AGGGCAGCTT CCAGCTCGGC CCGTTCGGCT TCACCTATGT CCCGCTCGCC
CATTCGATTC CCGAGGGCAA CGCGCTGCTG ATCGACACGC CGCACGGCCG CATCTTCCAC
ACCGGCGACT GGAAGATCGA CGAGGCGCCG CTGCTCGGCC AGCCCTCGAC CGCCGAGGAG
CTGACCGCGA TCGGCGACCA GGGCGTGCTC GCGCTGGTCT GCGATTCGAC CAACGTCTTC
AACGAGGAGG CGTCGGGCTC CGAGGCCGAC GTCCGCAAGG GCCTCGACGA GGCGATCGGC
GCCTGCAAGG CGCGCGTGTT GGTGACGACC TTCGCGTCGA ACGCCGCGCG GCTCCAGACG
CTGGGCGAGG TCGCGCAGGA TACCGGGCGC AAGCTGTGCG TCGCTGGCCG CTCGCTCGAC
CGCATCATCC GCGTCGCCAA GGCGAGCGGC TATCTCCAGC ATTTCCCGCC GGTGATCGAC
GTCGACGAGG CGATGCGCCT GCCCCCGCGG GAGGTGATGA TCATCGCCAC CGGCGGCCAG
GGCGAGGCGC GCGCCGCGCT GTCGCGCATC GCCTTCGACA GCCACCCGAT CAAGCTGTCG
GCGGGCGACA CGGTGGTGTT CTCGTCGAAG CAGATCCCCG GCAACGAGAT CGCGATCGGC
CGCATCCAGA ACGCGCTCGC CGCCAAGGGG GTCGAGATGA TCACCGACCG CCAGGCCGAG
GTCCATGTCT CGGGCCATCC GGGGCGGCCC GAGCTCAAGG CGATGTACGG ATGGATCCGG
CCGGAGATCA TCCTGCCGGT CCATGGCGAG CTGCGCCACA TGGCCGAGCA GGCGCGCTTC
GCCAAGAGCC TGGGGGTGCC GCACGGCATC GTCCAGTCGA ACGGCACGCT GGTGCGGCTG
GCGCCCGACG GTCCGAAGGC GATCGGCCAT GAACGCACCG GCCGCCTCGT CCTCGATGGC
GACGTGATCC TGCCCGCCGA CGGCTCGACG ATGAACGAGC GCCGCCGCGC CGGGCTCTAC
GGCTTCGTCG GCGTCACCGT CGTGATCGGC AAGGACGGGC GGCTGAAGGG CGAGCCCGCG
CTCCACCTGC AGGGCCTGCC GGTCGAGGAG GACCGCGAGG ACTTCGTCGC CGACGCCTGC
GCGGCCGCGG CCGACGCGGT CGCCAAGGGC GGCAAGGACG AGGCCAAGCT CAGGGAAGCG
ATCCGCCTCG CGGTGCGCCG CCGCGCGACC TCGTGGACCG GCAAGAAGCC GGTGGTCGAC
GTCGCGATCA TCCGGGTCTG A
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| Protein sequence | MTTPGNELLF LALGGSGEIG MNVNLYGTQG KWVMVDLGLT FADPGYPGVE LILPDLAFIE
ERADDLLGVV LTHGHEDHIG AIPYLAADLG VPLYATRFTA ELIKGKLDEE GLTGKVDLHV
IENEGSFQLG PFGFTYVPLA HSIPEGNALL IDTPHGRIFH TGDWKIDEAP LLGQPSTAEE
LTAIGDQGVL ALVCDSTNVF NEEASGSEAD VRKGLDEAIG ACKARVLVTT FASNAARLQT
LGEVAQDTGR KLCVAGRSLD RIIRVAKASG YLQHFPPVID VDEAMRLPPR EVMIIATGGQ
GEARAALSRI AFDSHPIKLS AGDTVVFSSK QIPGNEIAIG RIQNALAAKG VEMITDRQAE
VHVSGHPGRP ELKAMYGWIR PEIILPVHGE LRHMAEQARF AKSLGVPHGI VQSNGTLVRL
APDGPKAIGH ERTGRLVLDG DVILPADGST MNERRRAGLY GFVGVTVVIG KDGRLKGEPA
LHLQGLPVEE DREDFVADAC AAAADAVAKG GKDEAKLREA IRLAVRRRAT SWTGKKPVVD
VAIIRV
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