Gene Swit_2993 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwit_2993 
Symbol 
ID5200877 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingomonas wittichii RW1 
KingdomBacteria 
Replicon accessionNC_009511 
Strand
Start bp3279458 
End bp3279943 
Gene Length486 bp 
Protein Length161 aa 
Translation table11 
GC content64% 
IMG OID640582542 
ProductNADH dehydrogenase subunit I 
Protein accessionYP_001263482 
Protein GI148555900 
COG category[C] Energy production and conversion 
COG ID[COG1143] Formate hydrogenlyase subunit 6/NADH:ubiquinone oxidoreductase 23 kD subunit (chain I) 
TIGRFAM ID[TIGR01971] NADH-quinone oxidoreductase, chain I 


Plasmid Coverage information

Num covering plasmid clones39 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCCTCG GGCACATCAT CAAGTCGTTC ACGCTCTGGG AGTTCGTGAA GGCGCACTGG 
CTGACCCTGA AATATTTCTT CAGGGCCAAG GCGACGATCA ACTACCCGTT CGAGAAGAAC
CCGCTGTCGC CCCGCTTCCG CGGCGAGCAT GCGCTGCGCC GCTATCCGAA CGGCGAGGAG
CGCTGCATCG CGTGCAAGCT GTGCGAGGCG GTGTGCCCGG CGCAGGCGAT CACGATCGAG
GCCGAGCCGC GCGACGACGG CTCGCGCCGC ACCACCCGCT ACGACATCGA CATGACCAAG
TGCATCTTCT GCGGCTTCTG CCAGGAAGCC TGCCCGGTCG ACGCGATCGT CGAGGGACCC
AATTTCGAAT ATTCGACCGA AACCCGCGAA GAGCTCATCT ACGACAAGGC CAAGCTGCTC
GCCAATGGCG ACCGCTGGGA GCCGGCGATC GCCGCCAACC TTGCCGCCGA TGCGCCCTAC
CGGTAA
 
Protein sequence
MSLGHIIKSF TLWEFVKAHW LTLKYFFRAK ATINYPFEKN PLSPRFRGEH ALRRYPNGEE 
RCIACKLCEA VCPAQAITIE AEPRDDGSRR TTRYDIDMTK CIFCGFCQEA CPVDAIVEGP
NFEYSTETRE ELIYDKAKLL ANGDRWEPAI AANLAADAPY R