Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swit_2993 |
Symbol | |
ID | 5200877 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sphingomonas wittichii RW1 |
Kingdom | Bacteria |
Replicon accession | NC_009511 |
Strand | + |
Start bp | 3279458 |
End bp | 3279943 |
Gene Length | 486 bp |
Protein Length | 161 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 640582542 |
Product | NADH dehydrogenase subunit I |
Protein accession | YP_001263482 |
Protein GI | 148555900 |
COG category | [C] Energy production and conversion |
COG ID | [COG1143] Formate hydrogenlyase subunit 6/NADH:ubiquinone oxidoreductase 23 kD subunit (chain I) |
TIGRFAM ID | [TIGR01971] NADH-quinone oxidoreductase, chain I |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 39 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAGCCTCG GGCACATCAT CAAGTCGTTC ACGCTCTGGG AGTTCGTGAA GGCGCACTGG CTGACCCTGA AATATTTCTT CAGGGCCAAG GCGACGATCA ACTACCCGTT CGAGAAGAAC CCGCTGTCGC CCCGCTTCCG CGGCGAGCAT GCGCTGCGCC GCTATCCGAA CGGCGAGGAG CGCTGCATCG CGTGCAAGCT GTGCGAGGCG GTGTGCCCGG CGCAGGCGAT CACGATCGAG GCCGAGCCGC GCGACGACGG CTCGCGCCGC ACCACCCGCT ACGACATCGA CATGACCAAG TGCATCTTCT GCGGCTTCTG CCAGGAAGCC TGCCCGGTCG ACGCGATCGT CGAGGGACCC AATTTCGAAT ATTCGACCGA AACCCGCGAA GAGCTCATCT ACGACAAGGC CAAGCTGCTC GCCAATGGCG ACCGCTGGGA GCCGGCGATC GCCGCCAACC TTGCCGCCGA TGCGCCCTAC CGGTAA
|
Protein sequence | MSLGHIIKSF TLWEFVKAHW LTLKYFFRAK ATINYPFEKN PLSPRFRGEH ALRRYPNGEE RCIACKLCEA VCPAQAITIE AEPRDDGSRR TTRYDIDMTK CIFCGFCQEA CPVDAIVEGP NFEYSTETRE ELIYDKAKLL ANGDRWEPAI AANLAADAPY R
|
| |