Gene Swit_2991 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwit_2991 
Symbol 
ID5200875 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingomonas wittichii RW1 
KingdomBacteria 
Replicon accessionNC_009511 
Strand
Start bp3276410 
End bp3278413 
Gene Length2004 bp 
Protein Length667 aa 
Translation table11 
GC content70% 
IMG OID640582540 
ProductNADH dehydrogenase subunit G 
Protein accessionYP_001263480 
Protein GI148555898 
COG category[C] Energy production and conversion 
COG ID[COG1034] NADH dehydrogenase/NADH:ubiquinone oxidoreductase 75 kD subunit (chain G) 
TIGRFAM ID[TIGR01973] NADH-quinone oxidoreductase, chain G 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.687826 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCGAAGC TCACCGTAGA CGGGATCGAA GTCGAAGTCC CCGCCGGCGC CACGGTGCTC 
CAGGCCTGCG AAGCCGCGGG CAAGGAGATT CCGCGGTTCT GCTATCATGA GCGGCTGTCG
ATCGCCGGCA ATTGCCGCAT GTGCCTGGTC GAGGTGAAGC CCGGGCCGCC CAAGCCGCAG
GCGTCGTGCG CGCTGCCCGC CGCCGACAAG CAGGAGGTGT TCACCCAGTC GCCGATGGTC
AAGAAGGCGC GCGAGGGGGT GATGGAGTTC CTGCTCATCA ACCATCCGCT CGATTGCCCG
ATCTGCGACC AGGGCGGCGA GTGCGACCTG CAGGACCAGT CGGTCGCCTA TGGCAAGGGG
CAGAGCCGCT TCATCGAGAA CAAGCGCGCC GTCACCGACA AATATATGGG CCCGATCGTC
AAGACGACGA TGACCCGCTG CATCCAGTGC ACCCGCTGCG TCCGCTTCGC CGAGGAGGTG
TCGGGGATCG AGGAGATCGG CGCGATCCAT CGCGGCGAGA ATATGCAGAT CACCTCCTAT
CTCGAACAGG CGGTGACCAG CGAGCTGTCG GGCAACGTCG TCGACCTGTG CCCGGTCGGC
GCGCTGACGA GCAAGCCCTA TGCGTTCGAG GCGCGGCCCT GGGAGCTCAA GAAGACCCCC
GGCATCGACG TGATGGACGC GGTCGGCACC AATGTCCGCT TCGACAGCCG CGGCCGCCAG
GTGCTGCGCG TGCTGCCGCG GATCAACGAG GACGTGAACG AGGAATGGGC GTCGGACAAG
ACGCGCCACG CCGTTGACGG CCTGGTCCGC CGCCGCCTCG ACAAGCCGTT CGTCCGCCGC
AAGGGCAAGC TGGTCGAGGC GAGCTGGCAG GAGGCCTTCG CCGCGATCAA GGCCGCCAAG
GCGGGCAGCT CGGTCGCCGC GATCGCGGGC GACCAGCTCG ACTGCGAGAC GATGTACGCC
GCCAAGGCGC TGCTCGCGGC GATGGGGTCG ACCCTGCTCG AAGGCCGCCA GACCGGCATG
GACTATGACG TGTCGAGCCT CGCCGCGGTC AATTTCAACA GCACGATCGC CGGCGTCGAG
ACCGCCGACG CGATCCTGCT GGTCGGCAGC AACCTCCGCT GGGAGGCGCC GCTGATCAAC
ACCCGCGTCC GCAAGGCGGT GAAGCGCGGC GCCAGGGTCT TCGCGATCGG CGAGGAGGTG
AACCTCACCT ATCCGGCGCA GTGGCTCGGC AACGACCTCG GCCTGCTCGG CAAGCTGCCC
GAGGCGGTGA CCGCGGCCTT CGCCGGGGCC GAGCGCCCGG CGCTGATCGT CGGCGGCGGC
GCGCTCAAGG CGGGCGCGCA GGGCGCGACG CTGGCGCTGG TCAAGCCGCT CGGGCTGATC
AGGGACGGCT GGAACGGCTA CAATGTCGCC CATCTCGCCG CCGCGCGGAT GGGCGGGCTG
ATGCTCGGCT ATGCGCAGAA GGGCGGGATC GCCGACATCG TCGCGGCCGC GCCGAAGCTG
CTCTTCCTGC TCGGCGCCGA CGACGTCGAC CTGACCGCGT TCGACAAGAG CCTCAAGGTC
TATGTCGGCC ATCATGGCGA TGCCGGCGCG GCCGGAGCCG ACGTGGTGCT GCCCGGCGCC
GCCTATACCG AGAAGCCCGG CACCTATGTG AACACCGAGG GCCGCGTCCA GTTCGGCGAC
CGCGCCGTCT TCCCGCCGGG CGACGCCCGC GAGGACTGGG CGATCCTGCG CGCGCTGAGC
GAGGTGCTCG GCCACAAGCT GCCGTTCGAC AGCCTCGACC AGCTCCGCGC CGCGATGACG
GCCGAGGTGC CGGCGCTCGG CACCGGCGGC CTCGCCGGCT ATGCCTGGTC CGCGCCGAAG
CTGCCGGCCA AGGCCTCGGG CCCGGTCGGC TATCCGATCA AGGACTTCTA CCTCACCAAC
CCGATCGCCC GCGCCAGCGA CACGATGCAG CGCTGCTCGG CCGAACTCCT CCATGGGCAG
AGCTTCGCGG AGGCCGCCGA ATGA
 
Protein sequence
MPKLTVDGIE VEVPAGATVL QACEAAGKEI PRFCYHERLS IAGNCRMCLV EVKPGPPKPQ 
ASCALPAADK QEVFTQSPMV KKAREGVMEF LLINHPLDCP ICDQGGECDL QDQSVAYGKG
QSRFIENKRA VTDKYMGPIV KTTMTRCIQC TRCVRFAEEV SGIEEIGAIH RGENMQITSY
LEQAVTSELS GNVVDLCPVG ALTSKPYAFE ARPWELKKTP GIDVMDAVGT NVRFDSRGRQ
VLRVLPRINE DVNEEWASDK TRHAVDGLVR RRLDKPFVRR KGKLVEASWQ EAFAAIKAAK
AGSSVAAIAG DQLDCETMYA AKALLAAMGS TLLEGRQTGM DYDVSSLAAV NFNSTIAGVE
TADAILLVGS NLRWEAPLIN TRVRKAVKRG ARVFAIGEEV NLTYPAQWLG NDLGLLGKLP
EAVTAAFAGA ERPALIVGGG ALKAGAQGAT LALVKPLGLI RDGWNGYNVA HLAAARMGGL
MLGYAQKGGI ADIVAAAPKL LFLLGADDVD LTAFDKSLKV YVGHHGDAGA AGADVVLPGA
AYTEKPGTYV NTEGRVQFGD RAVFPPGDAR EDWAILRALS EVLGHKLPFD SLDQLRAAMT
AEVPALGTGG LAGYAWSAPK LPAKASGPVG YPIKDFYLTN PIARASDTMQ RCSAELLHGQ
SFAEAAE