| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_2986 |
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| Symbol | |
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| ID | 5197784 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | + |
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| Start bp | 3272781 |
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| End bp | 3273470 |
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| Gene Length | 690 bp |
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| Protein Length | 229 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 640582535 |
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| Product | NADH-quinone oxidoreductase, E subunit |
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| Protein accession | YP_001263475 |
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| Protein GI | 148555893 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1905] NADH:ubiquinone oxidoreductase 24 kD subunit |
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| TIGRFAM ID | [TIGR01958] NADH-quinone oxidoreductase, E subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 0.0736686 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.383268 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGTCCGACG CAGCCCATAT CCCCGACGAG GCCGAGACCC GCGCGCGCTG GGGCGGTTTC
GCCTGGACGC CGGAAAATGC GGCGCAGGCC GAGAAGATCA TCGCCCGCTA CCCGCCGGGC
CGCCAGCAGT CGGCGGTGAT GCCGCTGCTC GACCTCGCCC AGCGCCAGGT CGGCGCCGAG
ACCGGCACCC AGGGCTGGCT GCCGGTGCCG GTGATGGAAT ATATCGGCGC GCAGCTCGGC
ATGGCCTATA TCCGGGTCTA CGAGGTCGCG ACCTTCTACA CCATGTACAA CCTCGCGCCG
GTCGGCCGCT ACCATGTCCA GGTGTGCGGC ACGACGCCGT GCATGCTGCG CGGCTCCGAC
GACGTGCTGG AGGCCTGTTA CAAGAAGGGC CTGAAGAAGG GCGCGACGAC CGCCGACGGC
CTGTTCACGC TGACCGAGGT CGAGTGCCTC GGCGCCTGCG CCAACGCGCC GATGGTCCAG
ATCAACGACG ATAATTACGA GGACCTGACC TTCGACAGCA TGACGGCGGT GCTCGACACG
CTCGCTGCCG GCGGCCAGCC GAAGATCGGC CCGCAGGTCG AGCGCCAGAC GAGCTGCCCC
GAGGGCGGCC CGACCACGCT CCAGGAAATG GTCTCCGAGA ACCACGACTA TCGCGGCCGG
TGGGAGGCCA TGGGCAATGC TCCGGCATGA
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| Protein sequence | MSDAAHIPDE AETRARWGGF AWTPENAAQA EKIIARYPPG RQQSAVMPLL DLAQRQVGAE
TGTQGWLPVP VMEYIGAQLG MAYIRVYEVA TFYTMYNLAP VGRYHVQVCG TTPCMLRGSD
DVLEACYKKG LKKGATTADG LFTLTEVECL GACANAPMVQ INDDNYEDLT FDSMTAVLDT
LAAGGQPKIG PQVERQTSCP EGGPTTLQEM VSENHDYRGR WEAMGNAPA
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