| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_2985 |
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| Symbol | |
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| ID | 5197783 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | + |
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| Start bp | 3271561 |
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| End bp | 3272781 |
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| Gene Length | 1221 bp |
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| Protein Length | 406 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 640582534 |
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| Product | NADH dehydrogenase subunit D |
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| Protein accession | YP_001263474 |
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| Protein GI | 148555892 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0649] NADH:ubiquinone oxidoreductase 49 kD subunit 7 |
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| TIGRFAM ID | [TIGR01962] NADH dehydrogenase I, D subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.0128464 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.286368 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCTTCGA CCTACGACAC GCTGACTCCC GAAGCCCAGA AGGGCGAGGT CGAGATCCAG
AACTACACGA TCAACTTCGG CCCGCAGCAC CCGGCCGCGC ACGGCGTGCT GCGCATGGTG
ATGGAGCTCG ACGGCGAGAT CGTCGAGCGG GTCGACCCGC ATGTCGGCCT GCTCCATCGC
GGCACCGAGA AGCTGATCGA GTACAAGACC TATCTCCAGG CGCTGCCCTA TTTCGACCGG
CTCGACTATT GCTCGCCGCT CGGCATGGAG CACAGCTATG TGCTGGCGAT CGAGAAGCTG
CTCCAGCTCG AAGTGCCGCT GCGCGCGCAA TATCTGCGCG TGCTGTTCGC CGAGCTGACC
CGCATCTGCA ACCACATGCT CAACATCGGC AGCCACGTCA TGGACGTCGG CGCGATGACC
CCGAACCTGT GGCTGTTCGA GATTCGCGAG GACTGCCTCA ACTTCTTCGA GCGCGCGTCG
GGCGCGCGGA TGCACGCGGC CTGGTTCCGG CCCGGCGGCG TCCACCAGGA CGTGCCGCTC
AAGCTGCTGA CCGACATCGG CGACTGGCTC GACACCCGCC TGCCGCGGCT GTTCGAGGAC
GCGGTCTCGC TGTTCGCCGA CAACCGCATC TTCAAGCAGC GCAACGTCGA CGTCGGCGTG
GTGTCGAAGG AGGACGCGCT GGCCTGGGGC TTCTCCGGCC CGATGATCCG CGCCGCCGGC
ATCCCGTGGG ACATCCGCAA GTCGCAGCCC TACGACGTCT ACGACCGCAT GGACTTCGAG
ATTCCGGTCG GCACCAAGGG CGACTGCTAC GACCGCGTCA TGGTCCGCAT CGAGGAGGTG
CGGCAGTCGG CGCGGATCAT GAAGCAGTGC CTCAGCGAAA TGCCCGAGGG GCCGATCGCC
AGCCTCGACC GCAAGGTGGT GCCGCCCAAG CGCGGCGAGA TGAAGCGCTC GATGGAAGCG
CTGATCCACC ACTTCAAGCT CTATACCGAA GGCTTCCACG TGCCGGCCGG CGACGTCTAT
GTCGCGACCG AGAGCCCGAA GGGCGAGTTC GGCGTCTATC TGGTCTCGGA CGGCAGCAAC
AAGCCGTACC GCTGCAAGAT CCGGCCGACC GCGTTCAGCC ATCTCCAGGC GATGGACTTC
ATGATGAAGG GTCACATGCT GGCCGACACC ACCGCCATCC TCTCGGCGAT CGACGTCGTG
TTCGGGGAGT GTGACCGTTA A
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| Protein sequence | MASTYDTLTP EAQKGEVEIQ NYTINFGPQH PAAHGVLRMV MELDGEIVER VDPHVGLLHR
GTEKLIEYKT YLQALPYFDR LDYCSPLGME HSYVLAIEKL LQLEVPLRAQ YLRVLFAELT
RICNHMLNIG SHVMDVGAMT PNLWLFEIRE DCLNFFERAS GARMHAAWFR PGGVHQDVPL
KLLTDIGDWL DTRLPRLFED AVSLFADNRI FKQRNVDVGV VSKEDALAWG FSGPMIRAAG
IPWDIRKSQP YDVYDRMDFE IPVGTKGDCY DRVMVRIEEV RQSARIMKQC LSEMPEGPIA
SLDRKVVPPK RGEMKRSMEA LIHHFKLYTE GFHVPAGDVY VATESPKGEF GVYLVSDGSN
KPYRCKIRPT AFSHLQAMDF MMKGHMLADT TAILSAIDVV FGECDR
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