| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_2984 |
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| Symbol | |
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| ID | 5200748 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | + |
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| Start bp | 3270786 |
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| End bp | 3271439 |
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| Gene Length | 654 bp |
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| Protein Length | 217 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 640582533 |
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| Product | NADH (or F420H2) dehydrogenase, subunit C |
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| Protein accession | YP_001263473 |
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| Protein GI | 148555891 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0852] NADH:ubiquinone oxidoreductase 27 kD subunit |
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| TIGRFAM ID | [TIGR01961] NADH (or F420H2) dehydrogenase, subunit C |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 0.401685 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.0940527 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAGCGGGA CCAGCTTCGC CTTTCCGCGC TTCGCGTCGA ACGACGGCGT GGTCGAGGCC
GCGACCGCGG CGCTCGGCGC CCGCCTGATC GAGGCGCGCA GCTGCGTCGG CGAGATCGCC
CTGCACGTCG AGCGCGCGAG CCTGGTCGAG ACGATGCGCA TCCTGCGCGA CGAGCTCGCC
TATCAGCAGC TGATGGAGAT CGCCGGGGTC GACTATCCCG ACCGCGCCGA GCGGTTCGAG
GTGGTCTATT GCCTGCTGAG CGTCACGAAG AACCACCGCA TCCGCGTCCA TGTCGGCACC
GACGAGGTCC AGCCGGTGCC GTCGGTGACC GGGCTGTGGC CGGTCGCCGG CTGGCTCGAG
CGCGAGGTGT TCGACATGTA CGGCGTGCTG TTCGAAGGCA ATGCCGACCT GCGCCGCATC
CTCACCGACT ATGGCTTCCG CGGGCATCCG CAGCGCAAGG ACTTCCCGCT GACCGGCTAT
GTCGAGCTGC GCTATTCGGA GGCCCACAAG CGCGTCGTCT ATGAGCCGGT CAAGCTGGCC
CAGGACTTCC GCAGCTTCGA GTTCATGAGC CCGTGGGAAG GCGCCGACTA TATCCTGCCC
GGCGACGAGA AGGCCGAGGG CGAAGCGCCC ACGGGCGACG GAGCGAAGAA GTGA
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| Protein sequence | MSGTSFAFPR FASNDGVVEA ATAALGARLI EARSCVGEIA LHVERASLVE TMRILRDELA
YQQLMEIAGV DYPDRAERFE VVYCLLSVTK NHRIRVHVGT DEVQPVPSVT GLWPVAGWLE
REVFDMYGVL FEGNADLRRI LTDYGFRGHP QRKDFPLTGY VELRYSEAHK RVVYEPVKLA
QDFRSFEFMS PWEGADYILP GDEKAEGEAP TGDGAKK
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