| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_2979 |
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| Symbol | |
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| ID | 5200606 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | + |
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| Start bp | 3266048 |
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| End bp | 3268024 |
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| Gene Length | 1977 bp |
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| Protein Length | 658 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 640582528 |
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| Product | OPT family oligopeptide transporter |
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| Protein accession | YP_001263468 |
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| Protein GI | 148555886 |
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| COG category | [S] Function unknown |
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| COG ID | [COG1297] Predicted membrane protein |
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| TIGRFAM ID | [TIGR00728] oligopeptide transporters, OPT superfamily
[TIGR00733] putative oligopeptide transporter, OPT family |
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Plasmid Coverage information |
| Num covering plasmid clones | 43 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.344801 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCGGGCG GATCGGGCGG GACGGCGACA GGGCGCGAGC TGACCGTCCG GGGATTGCTG
CTCGGCGCGC TGATCACCTT CGTCTTCACC TCGGCCAACG TCTATCTCGG CCTGCGGGTC
GGACTGACCT TCGCCACCTC GATCCCGGCG GCGGTGATCT CGATGGCGGT GCTGCGGCTG
GTGCGCGGCG CGACGATCCA TGAGAACAAC ATCGTCCAGA CCGTCGCCTC GGCGGCGGGG
TGCATCGCCT CGATCATCTT CGTCCTGCCC GGCCTGATCA TGATCGGCTG GTGGCAGGGC
TTCCCCTTCT GGCAGACCTT CCTGCTCTGC GCCTCGGGCG GGCTGATGGG GGTGGTGCTG
TCGGTGCCGC TGCGCCGCGC GCTCGTCACC GGATCGGACC TGCCCTATCC CGAGGGCGTC
GCCGCGGCGG AGGTGCTCAA GGTCGGCACC CAGACGCGCG AGGGCGCGGC CGAGGCGCAG
GCGGGCCTGC GGACGATCCT CGTCGGCTCG ATCGCGTCGA TGGGCTTCGC GGTGATCGGG
GCCACGAAAC TGGTCGCGAC CGAGGCGTCG ACCTGGTTCC GGTTCGGCGC CAGCCACGCC
GCGACCGGAG TCTCGGCCTC GCTGTCCTTC GCGCTGCTCG GCGCGGGGCA TCTGGTCGGG
CTGTCGGTCG GGCTGGCGAT GGGGCTCGGC CTGGTCATCG CCTTCGGCGT CGCCACCCCG
ATCCTGTCGG CGATCGCCGC GATGCCGGGG CCGGCCGAGG CGGCGGCGCT GGCGGCGTTC
GGCGGGCAGG TGCGCTTCCT CGGCGCCGGC GTGATCGGCG CGGCGGCGAT CTGGACGCTG
GGCAAGCTCG CCCGGCCGCT GTGGCACGGC ATGGCCGGCG CGATCGCCGC GTCGAAGGCG
CGCAAGGCGT CGGGCGAGGC GCTGCCGATC GAGGAACAGG ACATGCCGGT CGGCTGGCTC
GGCCTGATCG TGGCGCTGGT GGCGCTGCCG ATCGTGGCGT TGCTCTGGCA CTTCGCGGAA
CAGGGGCCGC TCGCCGCCTT CGCGCTGCCG CTGTCGCTCG GCTTCTATGC CTATGTGCTG
CTGATGGGCG CGTTCGTCGC GGCCGTCTGC GGCTATATGG CCGGGCTGAT CGGATCGTCG
AACAGCCCGG TGTCGGGGCT GGCGATCCTC GCCGTGCTCG GCTCGGCGCT GCTGCTCGCG
GTTGCGGTGC AGCCGCTGGC GGGAAGCGGG GCGGGGCCGC AGCTCGTCGC CTTCGCGCTG
TTCGTCACCG GCCTCGTCCT CGCCTGCGCG GTGATCGCCA ACGACAATCT CCAGGACCTC
AAGACCGGCC AGCTGATCGG CGCGACGCCG TGGAAGCAGC AGGTGGCGCT GATCGTCGGC
GTGCTCGCCG GTTCGGCGGT GATCCCGCCG ATCCTCGACC TGCTCAACGC CGCCTATGGC
TTCGCGCCGC TGCCCGGCAC CGGCCTGCCG GTCCCGAGCG ATCCGCTCCC CGCGCCGCAG
GCGACGCTGA TCGCCGGCCT CGCGCGCGGC ATTTTGGGCG AGGGGCTCGA CTGGAACATG
ATCTTCATCG GCGCGGCGCT CGGCCTCGCG CTGGTCGCGC TCGACGGGCT GATGGGACGC
AGGGGCTGGC TGCGCCTGCC GCCGCTCGCG GTCGGGATCG GCATCTACCT GCCGATGTCG
GCGACCCTGC CGGTGGTGAT CGGCGCGCTG ATCGGCTGGC GCTACGACCG GCGCCGCGCC
GATCCGGCGG CGCAGCGCAT GGGCGTGCTG CTCGCCTCGG GCTTCATCGT CGGAGAGAGC
CTGTTCGGCG TCCTCCTCGC CGGGCTGATC GTCGCGACCG GCAGCGGCGC CCCGCTCGCG
CTGGTCGGCG CGGGCCATGA GGGCGCGGCG ATGGCGGCGG GGACGCTGCT GGTGGCGGCG
CTGCTCGTCG TCCTCTACCG CTGGACGGGG CGGACGGCGG GACGGTTGCA GGGGTGA
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| Protein sequence | MAGGSGGTAT GRELTVRGLL LGALITFVFT SANVYLGLRV GLTFATSIPA AVISMAVLRL
VRGATIHENN IVQTVASAAG CIASIIFVLP GLIMIGWWQG FPFWQTFLLC ASGGLMGVVL
SVPLRRALVT GSDLPYPEGV AAAEVLKVGT QTREGAAEAQ AGLRTILVGS IASMGFAVIG
ATKLVATEAS TWFRFGASHA ATGVSASLSF ALLGAGHLVG LSVGLAMGLG LVIAFGVATP
ILSAIAAMPG PAEAAALAAF GGQVRFLGAG VIGAAAIWTL GKLARPLWHG MAGAIAASKA
RKASGEALPI EEQDMPVGWL GLIVALVALP IVALLWHFAE QGPLAAFALP LSLGFYAYVL
LMGAFVAAVC GYMAGLIGSS NSPVSGLAIL AVLGSALLLA VAVQPLAGSG AGPQLVAFAL
FVTGLVLACA VIANDNLQDL KTGQLIGATP WKQQVALIVG VLAGSAVIPP ILDLLNAAYG
FAPLPGTGLP VPSDPLPAPQ ATLIAGLARG ILGEGLDWNM IFIGAALGLA LVALDGLMGR
RGWLRLPPLA VGIGIYLPMS ATLPVVIGAL IGWRYDRRRA DPAAQRMGVL LASGFIVGES
LFGVLLAGLI VATGSGAPLA LVGAGHEGAA MAAGTLLVAA LLVVLYRWTG RTAGRLQG
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