| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_2976 |
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| Symbol | |
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| ID | 5200603 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | + |
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| Start bp | 3261765 |
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| End bp | 3263843 |
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| Gene Length | 2079 bp |
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| Protein Length | 692 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 640582525 |
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| Product | PAS/PAC sensor signal transduction histidine kinase |
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| Protein accession | YP_001263465 |
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| Protein GI | 148555883 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG4191] Signal transduction histidine kinase regulating C4-dicarboxylate transport system |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 33 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.4081 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCGCGTG GCTGGCCGCG CATGGCCACG GATCGCCGGA CCATAGGTCT CACGGCGCTG
TTCGCGGCCA TCATCGTCGT GGCGATCCTC AAGGCTGCCC ACCTGACCCC GCCGTCCGAT
CGCTCCGGCG CCGTCGAGGT CGCGCTGCTG GTCTTCGCCG GGCTGCTGTC GGCGGCGGCG
ATGGTCTGGT CGTGGCGCTC GCACCTGATC GAGCGCGACC GGGTCGAGCG GCGCGAGCTG
GTCGACGCGG CCGAGCTGGC GGCGGTGATG GTGGTCGATG AGGAGGGGAC GATCCGTCAC
TGGTCGCGCG GCTGCGAGGA ACTGTACGGC TGGCCCGCGG CGGCGGCGGT CGGGCGCAGG
CGGGTCGACC TGCTCGACAC CCAGACGCCC GAGCCGGTCG AGGCGCTGTG GCACCGGCTC
CGCGTCGCCG GGCGGGTCAG CATCGAGCTG GTCGAGCGCC ATCGCGACGG TCATGAGCTG
ATCATCCACG ACCATGCCAA GATCATCCGC CACGGCGCCG ACCATCATTC GGCGGTGATC
GCGGTCACCG ACGTCACCGA ATGGCGGCGC GCGGAGGAGG CGCTGCGGCT GAGCGAGGCG
CGGCTCGCCA CCTCGGTCGC GGTGCAGGGC ATCTTCATCT ACGAATATGA CCTGATCGCC
GGCCAGCCGA TCTGGACGAC CAGCGGCGAG ACCTTCTTCG GCCTCGACGG CGAGGAGACC
GGGACGGGCC CGCGCTACTG GAGCGAGGCG CTCGACGCGC AGGTCCGCGA GGTCGTCGCG
ACGACGACGG CCAGCGGCCA GGACCGCGCC CATTTCGATT TCGACTTCCG CCACCCCGAC
GGCGCCGCGC GGCGCGGCGA AGGCTGGGCG CGGATCATCC GCAACCGCGA GGGCCGGCCG
GTGCGCCTGC TCGGCACCCA TCTCGACGTC ACCGAGCGGC GCGAGCGCGA GCAGGAGCTG
CGCGCGGGCG AGGCCGAGCG GCGGGCGATC CTGGCGACCG TGCCCGACGC GATGTTCGTC
TGCGACGAGC GCGGCCATGT CCGCGCGTGC AGCGCCACCG CGCGCCAGCT GCTCGGCTAT
GGCGAGGGCG AGCTGATCGG CCACCAGCTC AGCGACCTGG TCGACGATCC GCGCGGCCCG
GCGGCGGTGC GCCGCGACCT CGCCCGCGCG CGGCAGCTCG GCCCCGGCGG GCAGTGGCCG
GTGCCGATCA GCGTGCGCCG CGCCGACGGT GAATCGGTGC CGATCTCGTT CGTGCTCGGC
GACGCCTATG TCGACGGCGC GCGCATGTAC GTCGTGTTCG GCCGGGACAT GCGCCCGACC
ATCGCGACCG AGGAGCGCTT CCACCGGCTC ACCAACGACC TCGCCCAGGT CTCGCGCCTC
GGCATGATGG GGGAGATGGC GGGCGCGCTC GCGCATGAGC TGAGCCAGCC GCTGTCGGCG
ATCGTCAACT TCCTCGGCGC GGTCGACCTG ATGCTCGACG GCGACGACGA GCGGGTCGAC
ATCGCCCGGC TGCGCCAGGC GCTCCAGCGC GCCAGCGAGC AGGCGTCGCG CGCCGGGGAG
ATCATCCGCC GGCTGCGCGC CTTCATCCTG CGCGGCGAGG CCGACATGCG CGCCGAGCCG
CTGACCAGCC TGGTGCGCGA GGCGGCGGCG CTGGCGCTGT TCAACAGCAG CAGCTTCGGC
ATCCGGCTGT CCTATGATTT CGAGAATGAG GGCCGGGTCG TGCTCGGCGA CCGGATCCAG
ATCCAGCAGG TGCTGGTCAA CCTGATCCGC AACGCCGCCG ACGCGATGAC CGCGCAGGGC
GAGGGCCGGC GCGAACTGCT GATTGCGACG AAGATGGCGC GTGACAACTT GATCGAGGTA
ATTGTGAAGG ATTCGGGGCC GGGTATTGCA TCGGAGATGC TGGAGAGACT GTTCAGCCCC
TTCGCCACCA CCAAGCGCGA GGGACTCGGC TTCGGCCTGG CGATCTCGCG GCGGATCATC
GAGGCGCATG GCGGCCAGAT GTCGGCAACC TCGGCGCCGG ACGGCGGCGC CGTCTTCCGC
TTCACCCTGC CGGTGATGGA AGAGGAAGGG GCGCGATGA
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| Protein sequence | MPRGWPRMAT DRRTIGLTAL FAAIIVVAIL KAAHLTPPSD RSGAVEVALL VFAGLLSAAA
MVWSWRSHLI ERDRVERREL VDAAELAAVM VVDEEGTIRH WSRGCEELYG WPAAAAVGRR
RVDLLDTQTP EPVEALWHRL RVAGRVSIEL VERHRDGHEL IIHDHAKIIR HGADHHSAVI
AVTDVTEWRR AEEALRLSEA RLATSVAVQG IFIYEYDLIA GQPIWTTSGE TFFGLDGEET
GTGPRYWSEA LDAQVREVVA TTTASGQDRA HFDFDFRHPD GAARRGEGWA RIIRNREGRP
VRLLGTHLDV TERREREQEL RAGEAERRAI LATVPDAMFV CDERGHVRAC SATARQLLGY
GEGELIGHQL SDLVDDPRGP AAVRRDLARA RQLGPGGQWP VPISVRRADG ESVPISFVLG
DAYVDGARMY VVFGRDMRPT IATEERFHRL TNDLAQVSRL GMMGEMAGAL AHELSQPLSA
IVNFLGAVDL MLDGDDERVD IARLRQALQR ASEQASRAGE IIRRLRAFIL RGEADMRAEP
LTSLVREAAA LALFNSSSFG IRLSYDFENE GRVVLGDRIQ IQQVLVNLIR NAADAMTAQG
EGRRELLIAT KMARDNLIEV IVKDSGPGIA SEMLERLFSP FATTKREGLG FGLAISRRII
EAHGGQMSAT SAPDGGAVFR FTLPVMEEEG AR
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