Gene Swit_2967 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwit_2967 
Symbol 
ID5200463 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingomonas wittichii RW1 
KingdomBacteria 
Replicon accessionNC_009511 
Strand+ 
Start bp3252005 
End bp3252601 
Gene Length597 bp 
Protein Length198 aa 
Translation table11 
GC content74% 
IMG OID640582516 
ProductTetR family transcriptional regulator 
Protein accessionYP_001263456 
Protein GI148555874 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value0.699652 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones8 
Fosmid unclonability p-value0.0717993 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGCTA CAAAAAAATC GCAAGGGCGT GGCAGGCCGC GCGGATTCGA TCCCGAGCAG 
GCGATCGCGA CCGCGCAGGC GCTGTTCCAG GAGAAGGGCT ATGACGGAGT CGGCGTCGCC 
GACATCGGCA AGGCGCTCGG CATCACCCCG CCCAGCTTCT ACAACGCCTT CGGCAGCAAG 
GCGGCGCTGT TCGACAAGGT GCTCGACCGC TATGCGGGCA GCTTCGGCCG CTTCGTGCCC 
GACGCGCTCG ACGGCGGCGG CGGGGTCGCC GAGGCGATCG CGCGGGTGCT GCGCGACGCG 
GCGCGGCTCT ATGCGCGCAA GGACGGGATC GCCGGCTGTC TGGTGCTCGA CGGCGCGCGC 
AGCAGCGGCG ATGCCGAGGC GGTCGCGCTG ACCCGGCGGA AGATGGAGGA GAGCCAGGCG 
CTGATCGCGG CGCGGATCGC CGCCGAGGCG CCCGACCGCG CCGACCGGCT CGCCTCGATC 
GTCGTGACGG CGCTCAAGGG CCTGTCGGCG GCGGCGCGCG ACGGCGCGAG CCCCGACGAG 
CTGCGCGCCT TCGCCGATGC GGCGGCGGCG GGGTTCCGGG TGGCGCTGGG GGAGTAG
 
Protein sequence
MTATKKSQGR GRPRGFDPEQ AIATAQALFQ EKGYDGVGVA DIGKALGITP PSFYNAFGSK 
AALFDKVLDR YAGSFGRFVP DALDGGGGVA EAIARVLRDA ARLYARKDGI AGCLVLDGAR 
SSGDAEAVAL TRRKMEESQA LIAARIAAEA PDRADRLASI VVTALKGLSA AARDGASPDE 
LRAFADAAAA GFRVALGE