| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_2950 |
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| Symbol | |
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| ID | 5196565 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | + |
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| Start bp | 3233818 |
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| End bp | 3236370 |
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| Gene Length | 2553 bp |
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| Protein Length | 850 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 640582500 |
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| Product | TonB-dependent receptor, plug |
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| Protein accession | YP_001263440 |
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| Protein GI | 148555858 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.101832 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.0641531 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGGTCCC GCACCCGGTT TCATCTCCGC CTGCTCTCGG CCTCGGCCGC GCTGGCGATC
GCCGCGCCCG TTTTCGCGCA GGCGGCCGCT CCCGCCGCGT CGGCGGCCGA GGATCTCGCC
GCCGACGATG CCGACGGCGG CCTCGGCGCT ATCGTCGTCA CCGCCACCCG GCGCGAGACC
GACCTGCAGA AGACGCCGAT CTCGATCTCG GTGATCGGCG CCCAGGGCAT CCAGGACCGC
CACATCCAGA GCCTGTACAA CCTGACCGAC GGCTCGATCC CGTCGCTGCG CGTCACCACC
TTCGAGGCGC GCCAGTCGGC GCTGACGATC GGCATCCGCG GCATCGTCCC CTACGACCAG
AACCAGACCG CCCGCGACGG CGGCGTCAGC GTCTATATCG ACGGCGTGGC GCTTGGTAAG
ACCCAGGGCC TCAACGCCGC GCTGTTCGAC ATCGAGCGCA TGGAAGTGCT GAAGGGGCCG
CAGGGCACCC TGTTCGGCCG CAACACCGAG GGCGGCGCGC TGTCGATCGT CACCAAGGCG
CCCACCGGCC AGTTCGGCGG CCATATGGAC GCCGGGATCG GCAATTACGG CAGCCGCAGC
GCCGACGCGC ATGTCGATCT GCCGGCCTTC GCCAACCTCG CCCTGAAGTT CGAGGGCGTC
TACCAGCACC AGGACCCGAC GGTGAAGAAC CCGCTCGCGG GCTCCACCGG CTGGAACTAT
TATGATCGCA AGGGCGGCCG CGTCGCGGCG CGCTGGACGC CGGTCAGCGG CCTGACCGCG
GACTTCGCCT ATGACTATGC GAAGGACGAG AACACCCCGA ACTTCAGCCA GCTGATCAAC
TACAACCCGA ACGGCTACAC GGTCGGCTCG TATAACGGCG CGACCACGGG CACCGCGCTG
TTCCTGCCGG GCACGACGAC CCCCTGCGGC GGAACCATCG CCGCGGGCAC CAGCCGCCCC
GCCTGCATCG CTCCGCTGGC GCCGGCCGTC GTCCCGCACG CCGGGCGCCA GTCCTCGTCC
GACATCGGCG TGCCGCAGCA GCCCAGCGTC GACATCACCC ACGGCTTCTC GGCGAACGTC
AAGTACGACG TGGCGCCCTG GCTGCAGCTC CGCTCGATCA CCGCGTGGCG CGGCGTCTCG
ACCGACCAGT GGGACAATAG CGGCGGCGCG GCGCGGCAGA CCTTCTCGCC CTCGGCGAAC
TTCAGCCGCT ACAGCCTCTC CTTCCTGCGC CAGAACCAGT TCAGCCAGGA ATTCCAGGCG
GTCGGCAGCG TCGACCAGTT CGACTATGTG GTCGGCGCCT ATTACTACAC CGAGCATGCC
ACCGAGCATG CGGCGACGCC GCTGAGCAAT CTGTGGAACG CCGACGGCAC CGGCTACACG
GTCCGCAGCC CGATCGTGTC GGGCACGGTC ACCAGCGCCA ATTCGGGCTA TCAGCCCTTC
GATCCGTCGT GCGTCAACAC GCTGGCCGCC ACCGTCCCGG AATTCGCGAA CAGCTGCCAG
TTCATCGCCC GCGCCAGCGA GGCGCACGAC CATAGCACCT CGCTGTTCGG CAACGTCACC
TACACGCCGG CGGGCCTCGA CATGGTTCAC CTGACCGCCG GCGGCCGCTG GACGAAGGAC
CGGCGGCGCG GCCGGCTCTA CGTCGTGAAC AACACGGTGC AGCCCTTCAC CTTCAAGAAC
CGCATCAGCC GCTTCGATCC GATGCTGAAC CTCGCGGTCG ACGTGTCGAA CGACGTCCAC
GCCTATGCGA AATATGCCAC CGGCTTCCGC GCCGGCGGCG CCAACGACCG GTCGCAGCAG
TTCAACGCCT TCGGCCCGGA GACGGTGAAG TCGTACGAAG TCGGCGCGAA GATGGACTTC
TGGCAGCACC GCGCGCGCCT GAACGTCGCG GGCTACATCA TGGACCGTTC GAACACCCAG
TTCGACTTCG ACCTGTACGA TACCGCGTCG GGCAGCCCGA CGCTGGGCAG CCACATCGAG
CAGACGCAGA ATGCGGGCAA GACCAAGATC CGCGGCGTCG AGGTCGACCT CACCGTCATG
CCGGTCGACA AGCTGACCCT GACGGCGTCC TATGCCTATA CCCACTGGAA GGCGCCCTCG
GCGGTGAACC CGATCACCGG CGGCCTGCCG CAGCAGCTCT ACATCGTCTA CACGCCGAAG
AGCGCGGCGT CGGGCGCGAT CGACTATGTC CTGCCGGTCC CGGCCATCGC CAGCGACGCG
AATATCCGCT TCCACCTCGA CGGCAATTAT TCGGGCCGCC AGTACAGCTT CCAGCTCGAA
CCGACCCAGA CCGACTCGAG CTTCGTCGTC AACGGCCGCA TCACCCTCGG CGACATCGCG
GTCGGCGGCA ACAGCAAGGT CTCCTTCTCG GTCTGGTCGC GCAACCTGTT CAACACGACC
TATTATTACC GGCGCTCGGC GGCGAACTCC TCGCCGGTGC TGAACTATAA CGGCAGCGCG
CTGGTCTCGA CCAACTATGG CGGCGTGCTG GGCGACTATG CCAACCTCAA CCCGCCGCGC
ACCTTCGGCG GCGAGATCTC CGTCCACTTC TGA
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| Protein sequence | MRSRTRFHLR LLSASAALAI AAPVFAQAAA PAASAAEDLA ADDADGGLGA IVVTATRRET
DLQKTPISIS VIGAQGIQDR HIQSLYNLTD GSIPSLRVTT FEARQSALTI GIRGIVPYDQ
NQTARDGGVS VYIDGVALGK TQGLNAALFD IERMEVLKGP QGTLFGRNTE GGALSIVTKA
PTGQFGGHMD AGIGNYGSRS ADAHVDLPAF ANLALKFEGV YQHQDPTVKN PLAGSTGWNY
YDRKGGRVAA RWTPVSGLTA DFAYDYAKDE NTPNFSQLIN YNPNGYTVGS YNGATTGTAL
FLPGTTTPCG GTIAAGTSRP ACIAPLAPAV VPHAGRQSSS DIGVPQQPSV DITHGFSANV
KYDVAPWLQL RSITAWRGVS TDQWDNSGGA ARQTFSPSAN FSRYSLSFLR QNQFSQEFQA
VGSVDQFDYV VGAYYYTEHA TEHAATPLSN LWNADGTGYT VRSPIVSGTV TSANSGYQPF
DPSCVNTLAA TVPEFANSCQ FIARASEAHD HSTSLFGNVT YTPAGLDMVH LTAGGRWTKD
RRRGRLYVVN NTVQPFTFKN RISRFDPMLN LAVDVSNDVH AYAKYATGFR AGGANDRSQQ
FNAFGPETVK SYEVGAKMDF WQHRARLNVA GYIMDRSNTQ FDFDLYDTAS GSPTLGSHIE
QTQNAGKTKI RGVEVDLTVM PVDKLTLTAS YAYTHWKAPS AVNPITGGLP QQLYIVYTPK
SAASGAIDYV LPVPAIASDA NIRFHLDGNY SGRQYSFQLE PTQTDSSFVV NGRITLGDIA
VGGNSKVSFS VWSRNLFNTT YYYRRSAANS SPVLNYNGSA LVSTNYGGVL GDYANLNPPR
TFGGEISVHF
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