| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_2949 |
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| Symbol | |
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| ID | 5196564 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | + |
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| Start bp | 3231553 |
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| End bp | 3233328 |
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| Gene Length | 1776 bp |
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| Protein Length | 591 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 640582499 |
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| Product | AMP-dependent synthetase and ligase |
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| Protein accession | YP_001263439 |
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| Protein GI | 148555857 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1022] Long-chain acyl-CoA synthetases (AMP-forming) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.179874 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.0506355 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGGACCT TCGAGCGATT TCCGAACCTC GTCACCATGT TCTTCACGCG CGCCCGCGAG
AAGGGCGACG CGCCCTTCCT GTGGGCGAAG CGCGACGGCG CCTGGACGCC GCTGAGCTGG
ACCGAGGTCG CGCGCCGGGT CGCCTCGCTC GCCGCCGCGC TGCGCGCGCA GGGCCTGCGC
GAGGGCGACC GCGTCGTGCT GGTGTCGGAG AACCGCCCCG AATTCTGCAT CGCCGACCTC
GCGATCATGA CCGCGGGCTG CGTGACGGTG CCGACCTACA CCACCAACAC CGAACGCGAC
CACACCCATA TCCTGGAGAA TAGCGGCGCG CGCGCGGCGA TCGTCTCGAC CGCGAAGCTG
GCGCAGGTGC TGCTGCCGGC GATCGTCCGC TCCTCGACCT GCGAATTCCT GATCGGCATG
GAGCCGCTGC CCGCGACCGC GGTCCGCACC CTCGACTTCG CGGCGCTCGC CGACGATCCG
GCCGCCGCCG TCGCCGCGGC CGAGGCCGCC GTCGCCGACC TGCGGCGCGA GGACCTCGCC
TGCCTGATCT ACACCAGCGG CACCGGCGGC GCGCCGCGCG GGGTACGCCA GCATCATGGC
GCGATCCTGT GCAACGTCGA AGGCTGCGTC GACATCATCG CCGAGGATTT CGGCTGGGAC
GAGGAGGTGT TCCTGTCCTT CCTGCCGCTG AGCCACGCCT ATGAGCATTC GGGCGGGCAG
TTCCTGCCGA TCGCGCTGGG CGGGCAGATC TATTATGCCG AGGGGCTGGA GAAGCTCGCC
GCCAATATCG AGGAGACGCG GCCGACGATC ATGGTCGTCG TCCCGCGCCT GTTCGAGCTG
CTGCGCGCCC GCCTCATCAA GGCGGTCGAG AAGCAGGGCG GGATCGGCCA GAAGCTGCTC
GACAAGGCGC TGGAGCTGGG CGCGCGCGAG AAGCTGCGGC TGGCCGACTA TCCGTACAAG
CTGGCGATCG ACCTACTGCT CAAGCCCAAG GTGCAGAAGC GCTTCGGCGG GCGGATCAAG
GCGCTCGTCT CGGGCGGCGC GCCGCTCAAT CCCGAGGTCG GGCAGTTCTT CTCCTCGCTC
GGCCTCACCC TGCTCCAGGG CTATGGCCAG ACCGAGGCGG GGCCGGTCGT CTCGTGCAAC
CGGCCGAAGG CGGGGATCAA GCTTGACACG GTCGGCCCGC CGATGAAGGG GGTCGAGGTC
AGGATCGCCG AGGACGGGGA GATACTGGTC CGCGGCGAGC TGGTGATGGC CGGCTACTGG
CGCAACGAGG CGGAGACCGA ACGGGTGCTG AAGGACGGCT GGCTCCATTC GGGCGACGTC
GGCCATCTCG ACGAGCGGGG GCGGCTCCGG ATCACCGACC GCAAGAAGGA CCTGATCGTC
AACGACAAGG GCGACAATAT CGCGCCGCAG AAGGTGGAGG GCATGCTGAC CCTCCAGCCC
GAGATCGCCC AGGCGATGGT GGCGGGCGAC AAGCGGCCCT ATATCGTCGG CCTCGTCGTC
CCCGACCAGG AATGGCTGGC CGGCTGGGCC GGCGAGCGCG GCCTGCCGCC GGTGCTGGCG
GAGCTGAAGG GCAATGCCGA TTTCCACCGC GCGCTGATGG CGGCGGTCGA CCGGGTCAAC
GCCGACCTGT CGGTGATCGA GAAGGTCCGC CGCATCGCCA TCGCCGACGA GCCCTTCTCG
ATCGAGAACG AGCAGATGAC CCCGTCGATG AAGAACCGCC GCCACGCGAT CCGCGCGATC
TATGGCGACC GGATGGATGC GCTTTACGGG GGGTAG
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| Protein sequence | MRTFERFPNL VTMFFTRARE KGDAPFLWAK RDGAWTPLSW TEVARRVASL AAALRAQGLR
EGDRVVLVSE NRPEFCIADL AIMTAGCVTV PTYTTNTERD HTHILENSGA RAAIVSTAKL
AQVLLPAIVR SSTCEFLIGM EPLPATAVRT LDFAALADDP AAAVAAAEAA VADLRREDLA
CLIYTSGTGG APRGVRQHHG AILCNVEGCV DIIAEDFGWD EEVFLSFLPL SHAYEHSGGQ
FLPIALGGQI YYAEGLEKLA ANIEETRPTI MVVVPRLFEL LRARLIKAVE KQGGIGQKLL
DKALELGARE KLRLADYPYK LAIDLLLKPK VQKRFGGRIK ALVSGGAPLN PEVGQFFSSL
GLTLLQGYGQ TEAGPVVSCN RPKAGIKLDT VGPPMKGVEV RIAEDGEILV RGELVMAGYW
RNEAETERVL KDGWLHSGDV GHLDERGRLR ITDRKKDLIV NDKGDNIAPQ KVEGMLTLQP
EIAQAMVAGD KRPYIVGLVV PDQEWLAGWA GERGLPPVLA ELKGNADFHR ALMAAVDRVN
ADLSVIEKVR RIAIADEPFS IENEQMTPSM KNRRHAIRAI YGDRMDALYG G
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