| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_2946 |
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| Symbol | |
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| ID | 5198521 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | + |
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| Start bp | 3229399 |
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| End bp | 3230358 |
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| Gene Length | 960 bp |
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| Protein Length | 319 aa |
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| Translation table | 11 |
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| GC content | 75% |
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| IMG OID | 640582496 |
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| Product | topoisomerase IB-like protein |
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| Protein accession | YP_001263436 |
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| Protein GI | 148555854 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG3569] Topoisomerase IB |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 0.361669 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.0194958 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGGCACC GCCCGATCGA CCCGACCGAC ACGATCGATT CCGCCCCCGG CATCACCCGC
GTCCGGCGCG GCGGCGGGTG GCGCTTCGTC GCCCCCGACG GCTCGACCAT CCGCGACCCC
GACGAGCGGA TGCGGATCCT CGCGCTCGGC ATCCCGCCGG CCTGGCGCCG GGTGTGGATC
AACCCCGATC CGCGCGCGCC GGTCCAGGCG ACCGGGATCG ATGCCGCCGG GCGCAAGCAA
TATCGCTACG ACAGCGCGTG GCGCGAGGCG CGCGACGAGG AGAAATTCGC CGCGCTTCCC
GCGTTCGCCG CGCACCTGCC CCGGCTGCGC GCCGTCGTCC GCCGCGCGCT CGACAGCGAC
GATCCGTGGG AACGCGCGCG GGCGGCAGCG GTGCGGCTGC TCGACGGCTT CGCGATCCGG
GTCGGATCGG ACGATTCGGC GGCGCGCGGC AGCTTCGGCG CGACGACGCT GCTCAACCGC
CACGCGCGGA TCGACGGCGA CGCGATCCGG CTGTGCTTCT TCGGCAAGCA CGGCATCCGC
GCCGAGCTGT CGGGGCGCGA CGCGGCGCTG GCGGCGGCGC TCGCCGAGCT CAAGCAGGCG
GGGGCCGGCG AGCTGTTCGC GATGCGGTCG GGGGTGCGGG TGCGCGCCGC CGACATCAAC
CAGTGGATCG CCGAGCTGAC CGACGGCAGC GGCACCGCCA AGACCTTCCG GACCTGGCGC
GCCTGCGCGG TCGCGGCGGG GATGCTGGCG CGCGGGCGGC GGACCTCGGT CAAGGCCCTG
CTGGAGGAGG TGGCCCGCCA GCTCGGCAAC ACGCCGGCGG TGTGCCGAAC ATCCTATGTC
GCGCCGGCCT TCATCGAGAT GGCCAAGGCG GGCCGCTGGA TCGAGACGGT GCCCGCCATG
CCGCGCGGCC TGCGCGCGAG CGAACGGGCG AGCCTGGCGG TGCTGACCGG CCGGACGTGA
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| Protein sequence | MRHRPIDPTD TIDSAPGITR VRRGGGWRFV APDGSTIRDP DERMRILALG IPPAWRRVWI
NPDPRAPVQA TGIDAAGRKQ YRYDSAWREA RDEEKFAALP AFAAHLPRLR AVVRRALDSD
DPWERARAAA VRLLDGFAIR VGSDDSAARG SFGATTLLNR HARIDGDAIR LCFFGKHGIR
AELSGRDAAL AAALAELKQA GAGELFAMRS GVRVRAADIN QWIAELTDGS GTAKTFRTWR
ACAVAAGMLA RGRRTSVKAL LEEVARQLGN TPAVCRTSYV APAFIEMAKA GRWIETVPAM
PRGLRASERA SLAVLTGRT
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