| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_2937 |
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| Symbol | |
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| ID | 5199755 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | + |
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| Start bp | 3225701 |
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| End bp | 3226372 |
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| Gene Length | 672 bp |
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| Protein Length | 223 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 640582487 |
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| Product | phage shock protein A, PspA |
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| Protein accession | YP_001263427 |
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| Protein GI | 148555845 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG1842] Phage shock protein A (IM30), suppresses sigma54-dependent transcription |
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| TIGRFAM ID | [TIGR02977] phage shock protein A |
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Plasmid Coverage information |
| Num covering plasmid clones | 33 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.0393136 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGGGATTT TCTCCCGAAC CCGCGACATC ATCGCCGCCA ACGTCACCGA CCTTCTCGAC
AAGGCGGAGG ACCCGGCGAA GATGATCCGC ATGATCATCC TCGAGATGGA GGAGACGCTG
GTCGAGGTCC GCGCCTCGGC GGCGCGCACG ATCGCCGACC AGAAGGAGCT GCGCCGCCAG
ATCGCCAAGC TCGACACCGT CCAGGCCAAC TGGCTGGAGA AGGCGGAGCT GGCGCTGTCG
AAGGACCGCG AGGACCTCGC CAAGGCGGCG CTGGTCGAGA AGCAGAAGGC GGCCGACCTG
GCCGAGCAGC TCAACGACGA GATCGCGCTG CTCGACGAAT CGCTCAAGGC GTCGGAGGCC
GACATCGCCA AGCTGCAGGG CAAGCTGCGC GAGGCGCGCG CCCGCCAGAA CAGCATCGTC
ACCCGCCTCG AATCGGCGAA CAACCGCGCC CGCATGCGCG AGATGTACGC CGGCCCGAAG
ATCGACGAGG CCTTCTCGCG CTTCGAGCTG CTCGAACGCC GGGTCGACTA TGCCGAGGGC
CGCGCCGAGG CGGCGGGCAT GGGCGGCGCG CCCAAGACGC TCGACGAGGA GATCGCCGAG
CTGCGTTCCT CGGACAAGGT CGATGCCGAG CTGGCCGCGC TGAAGGCCAA GGCATCGGGC
AAGGGGGCCT GA
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| Protein sequence | MGIFSRTRDI IAANVTDLLD KAEDPAKMIR MIILEMEETL VEVRASAART IADQKELRRQ
IAKLDTVQAN WLEKAELALS KDREDLAKAA LVEKQKAADL AEQLNDEIAL LDESLKASEA
DIAKLQGKLR EARARQNSIV TRLESANNRA RMREMYAGPK IDEAFSRFEL LERRVDYAEG
RAEAAGMGGA PKTLDEEIAE LRSSDKVDAE LAALKAKASG KGA
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