| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_2929 |
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| Symbol | |
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| ID | 5196153 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | + |
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| Start bp | 3217485 |
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| End bp | 3218744 |
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| Gene Length | 1260 bp |
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| Protein Length | 419 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 640582479 |
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| Product | MiaB-like tRNA modifying enzyme |
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| Protein accession | YP_001263419 |
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| Protein GI | 148555837 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0621] 2-methylthioadenine synthetase |
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| TIGRFAM ID | [TIGR00089] RNA modification enzyme, MiaB family
[TIGR01579] MiaB-like tRNA modifying enzyme |
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Plasmid Coverage information |
| Num covering plasmid clones | 35 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.301495 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCGGTC CCGAGCTGAT CACATTGGGG TGCCGGCTCA ACATCGCCGA GAGCGAGGCG
ATGCGCGCGG CGATGGCCGA TGCCGACGAC CTGGTGATCG TCAATAGCTG CGCGGTCACC
GCCGAGGCGG TCAAGCAGGC GCGCAAGGCG ATCCGCCAGG CGGCGAAGCG CCGGCCCGAG
GCGCGGATCG TCGTCACCGG CTGCGCCGCG CAGACCGATC CGGCCGCCTT CGCGGCGATG
CCCGAGGTCG CCCGCGTGAT CGGCAATGCC GACAAGGGCC GGGCCGACCT GTTCGCCTTC
GATCGCGGCG CGCGCGCCGA TGTCCATGTC TCCGACGTCA TGGCGGTCCG CGACACCGCG
CCGCACATGG CCGCCGCCTT CGCCGCCCAT GCCCGCGCCT TCGTCGAGGT CCAGAATGGC
TGCGACCATC GCTGCACCTT CTGCGTGATC CCCTATGGCC GGGGCAACAG CCGCTCGGTC
CCCGCCGGGA TCGTGATCGA CCGCATCAAG GCGCTGGTCG ACGACGGCCA TGCCGAGGTG
GTGCTGACCG GGGTCGACCT GACCAGCTAC GGCCCCGACC TGCCCGGCGC GCCGACGCTG
GGGCAGCTCG TCGAGCGCAT CCTCACCCAT GTGCCGGGGC TGCGGCGGCT GCGCCTCTCC
TCGCTCGATT CGATCGAGAT CGACGACCGG CTGTTCGCGC TGCTGACGCA GGAGGCGCGG
ATGATGCCGC ACGTCCACCT GTCGCTGCAG GCCGGTGACG ACCTGATCCT CAAGCGGATG
AAGCGCCGCC ACAGCCGCGC CCAGGCAGTG GCGATGGTCG AGCGGCTCCG GGCGGCCCGG
CCCGAGATCG CGATCGGTGC CGACCTGATC GCCGGCTTCC CGACCGAGGA CGAGACGATG
GCCGCCAACA GCGCCGCGCT GATCGACGAT TGCGACATCG TCTTCGGCCA TGTCTTCCCT
TTTTCGCCGC GCGCCGGCAC CCCCGCCGCG CGGATGCCGC AGCTCGACCG CGCCACGATC
CGCCGCCGCG CCGCCGATCT GCGCGCGCGG GCCGAGGCGC GCCGCGCCCG CTGGCTGGGG
ACGCTGGTCG GCACCCGCCA GGCGGTGCTC GCCGAACGCG GCGGCGGCGG CCATGCGCCC
AATTTCGCGC GGGTGCGTTT CGAGGGGACC GCGCCCGCGC CGGGCGCGAT CGCGAACATC
ATCATCACCG GCGTCGACGA CGGCGCCCTG ACCGGAAGAG TGGCGGACGA GACGGCATGA
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| Protein sequence | MSGPELITLG CRLNIAESEA MRAAMADADD LVIVNSCAVT AEAVKQARKA IRQAAKRRPE
ARIVVTGCAA QTDPAAFAAM PEVARVIGNA DKGRADLFAF DRGARADVHV SDVMAVRDTA
PHMAAAFAAH ARAFVEVQNG CDHRCTFCVI PYGRGNSRSV PAGIVIDRIK ALVDDGHAEV
VLTGVDLTSY GPDLPGAPTL GQLVERILTH VPGLRRLRLS SLDSIEIDDR LFALLTQEAR
MMPHVHLSLQ AGDDLILKRM KRRHSRAQAV AMVERLRAAR PEIAIGADLI AGFPTEDETM
AANSAALIDD CDIVFGHVFP FSPRAGTPAA RMPQLDRATI RRRAADLRAR AEARRARWLG
TLVGTRQAVL AERGGGGHAP NFARVRFEGT APAPGAIANI IITGVDDGAL TGRVADETA
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