Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swit_2924 |
Symbol | |
ID | 5199931 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sphingomonas wittichii RW1 |
Kingdom | Bacteria |
Replicon accession | NC_009511 |
Strand | + |
Start bp | 3210064 |
End bp | 3211326 |
Gene Length | 1263 bp |
Protein Length | 420 aa |
Translation table | 11 |
GC content | 76% |
IMG OID | 640582474 |
Product | major facilitator transporter |
Protein accession | YP_001263414 |
Protein GI | 148555832 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG2807] Cyanate permease |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 42 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.476438 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCCGAATG GCGGCGGCGA CGCGACCGTG CGTGACGCGC GGCGATGGCC GCTGCTCGTC GCGGTGGTGC TGGTCGGGCT CAACCTCCGC CCGTTCCTGA CGGCGGTCGG CCCGCTCGCC GGCGGCATCC GGCCCGATAC GGGGATGACG CTCCAGGCGC TGGCGTCGCT CACCCTGGTG CCGATGCTGC TGATGGGGCT GCTCGCCTTT CTCGGGCCGG CGGTCGAGGC GGCGGTCGGC GCCCGCCGCG CGGTGGTCGC GTCGCTCGCG CTGCTCGCGC TCGGCTCGTT GCTCCGCCTG GCCGCGGGGA GCGCCGCCGG GCTGGTCGGC ACCGCCGCGC TGATCGGGCT CGGCGTCGCC GTGATCCAGG CGGTGTTCCC CGGCATATTG AAGCGCCATT TCCCCGACCG GCTGCCGCTG GCGATGGGGC TCTATTCGGC GATGCTGATG GGCGGCGGCG CGGTCGGCGC GCAACTGTCG CCGCTGATCG CCGCCGCGAC GGGAAGCTGG CGGGTCGGGC TCGGCTGGCT CGGCCTGCCC GCGCTCGCGG CGCTGGCCGT CGCGCTGGTG GCGATCCCGA AGGGCGAAAC CTCGGCCCCT GGCGAGGCTC TTCCCGTCGG CCGGCTGTTA CGGCGGCCGC GCACCTGGTT GCTGATGGCC AGCTTCGGGC TGGTCAACGG CGGCTATTCG ACGGTCGTCG CCTGGCTGTC GCCCTTCTAC CAAGACCATG GCTGGGCCGC CGCGGCGAGC GGCCGGCTGC TCGCGGCGAT GGCGGCGAGC CAGGCGGTCG CGGCCCTGCT GTGCCCGCTG CTCGCGCGCC GCCATCGCGA CCGGCGCCCC TGGCTGTGGC TGACCATGGC GCTGCAGGCC GTCGGCTTCG CCGGGCTGGC CGCCGCGCCC GCTGCCGCGC CGCTGCTCTG GGCGTGCTGC GCCGGGGCGG GGCTCGGCGG CTGCTTCGCG CTCACCCTGG TCGTCGCGCT CGACCATCTC CCCCGGCCTG CCGACGCCGG CGCGCTCGCC GCGCTGATGC AGGGCGGCGG CTTCCTGATC GCCGGGACCG CGCCCTGGGT GGTGGCGGTG CTGCACGATC GCACCGGCGG GTTCGCGGCG GGTTGGATGC TCCACCTCGC CGAGATCGGG CTGGTCGCCG GGCTGACCCT GCGCCTGCGC CCCGATTCCT ATCGCGCGGC GATGGCGTCG CCGCCCGATC GCGCGCGGGC CCGCCGGGCG GAGGCGCCGC CGCCCTGCAC CTTGCGATCC TGA
|
Protein sequence | MPNGGGDATV RDARRWPLLV AVVLVGLNLR PFLTAVGPLA GGIRPDTGMT LQALASLTLV PMLLMGLLAF LGPAVEAAVG ARRAVVASLA LLALGSLLRL AAGSAAGLVG TAALIGLGVA VIQAVFPGIL KRHFPDRLPL AMGLYSAMLM GGGAVGAQLS PLIAAATGSW RVGLGWLGLP ALAALAVALV AIPKGETSAP GEALPVGRLL RRPRTWLLMA SFGLVNGGYS TVVAWLSPFY QDHGWAAAAS GRLLAAMAAS QAVAALLCPL LARRHRDRRP WLWLTMALQA VGFAGLAAAP AAAPLLWACC AGAGLGGCFA LTLVVALDHL PRPADAGALA ALMQGGGFLI AGTAPWVVAV LHDRTGGFAA GWMLHLAEIG LVAGLTLRLR PDSYRAAMAS PPDRARARRA EAPPPCTLRS
|
| |