Gene Swit_2924 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwit_2924 
Symbol 
ID5199931 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingomonas wittichii RW1 
KingdomBacteria 
Replicon accessionNC_009511 
Strand
Start bp3210064 
End bp3211326 
Gene Length1263 bp 
Protein Length420 aa 
Translation table11 
GC content76% 
IMG OID640582474 
Productmajor facilitator transporter 
Protein accessionYP_001263414 
Protein GI148555832 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG2807] Cyanate permease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones42 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.476438 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCGAATG GCGGCGGCGA CGCGACCGTG CGTGACGCGC GGCGATGGCC GCTGCTCGTC 
GCGGTGGTGC TGGTCGGGCT CAACCTCCGC CCGTTCCTGA CGGCGGTCGG CCCGCTCGCC
GGCGGCATCC GGCCCGATAC GGGGATGACG CTCCAGGCGC TGGCGTCGCT CACCCTGGTG
CCGATGCTGC TGATGGGGCT GCTCGCCTTT CTCGGGCCGG CGGTCGAGGC GGCGGTCGGC
GCCCGCCGCG CGGTGGTCGC GTCGCTCGCG CTGCTCGCGC TCGGCTCGTT GCTCCGCCTG
GCCGCGGGGA GCGCCGCCGG GCTGGTCGGC ACCGCCGCGC TGATCGGGCT CGGCGTCGCC
GTGATCCAGG CGGTGTTCCC CGGCATATTG AAGCGCCATT TCCCCGACCG GCTGCCGCTG
GCGATGGGGC TCTATTCGGC GATGCTGATG GGCGGCGGCG CGGTCGGCGC GCAACTGTCG
CCGCTGATCG CCGCCGCGAC GGGAAGCTGG CGGGTCGGGC TCGGCTGGCT CGGCCTGCCC
GCGCTCGCGG CGCTGGCCGT CGCGCTGGTG GCGATCCCGA AGGGCGAAAC CTCGGCCCCT
GGCGAGGCTC TTCCCGTCGG CCGGCTGTTA CGGCGGCCGC GCACCTGGTT GCTGATGGCC
AGCTTCGGGC TGGTCAACGG CGGCTATTCG ACGGTCGTCG CCTGGCTGTC GCCCTTCTAC
CAAGACCATG GCTGGGCCGC CGCGGCGAGC GGCCGGCTGC TCGCGGCGAT GGCGGCGAGC
CAGGCGGTCG CGGCCCTGCT GTGCCCGCTG CTCGCGCGCC GCCATCGCGA CCGGCGCCCC
TGGCTGTGGC TGACCATGGC GCTGCAGGCC GTCGGCTTCG CCGGGCTGGC CGCCGCGCCC
GCTGCCGCGC CGCTGCTCTG GGCGTGCTGC GCCGGGGCGG GGCTCGGCGG CTGCTTCGCG
CTCACCCTGG TCGTCGCGCT CGACCATCTC CCCCGGCCTG CCGACGCCGG CGCGCTCGCC
GCGCTGATGC AGGGCGGCGG CTTCCTGATC GCCGGGACCG CGCCCTGGGT GGTGGCGGTG
CTGCACGATC GCACCGGCGG GTTCGCGGCG GGTTGGATGC TCCACCTCGC CGAGATCGGG
CTGGTCGCCG GGCTGACCCT GCGCCTGCGC CCCGATTCCT ATCGCGCGGC GATGGCGTCG
CCGCCCGATC GCGCGCGGGC CCGCCGGGCG GAGGCGCCGC CGCCCTGCAC CTTGCGATCC
TGA
 
Protein sequence
MPNGGGDATV RDARRWPLLV AVVLVGLNLR PFLTAVGPLA GGIRPDTGMT LQALASLTLV 
PMLLMGLLAF LGPAVEAAVG ARRAVVASLA LLALGSLLRL AAGSAAGLVG TAALIGLGVA
VIQAVFPGIL KRHFPDRLPL AMGLYSAMLM GGGAVGAQLS PLIAAATGSW RVGLGWLGLP
ALAALAVALV AIPKGETSAP GEALPVGRLL RRPRTWLLMA SFGLVNGGYS TVVAWLSPFY
QDHGWAAAAS GRLLAAMAAS QAVAALLCPL LARRHRDRRP WLWLTMALQA VGFAGLAAAP
AAAPLLWACC AGAGLGGCFA LTLVVALDHL PRPADAGALA ALMQGGGFLI AGTAPWVVAV
LHDRTGGFAA GWMLHLAEIG LVAGLTLRLR PDSYRAAMAS PPDRARARRA EAPPPCTLRS