Gene Swit_2922 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwit_2922 
Symbol 
ID5199290 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingomonas wittichii RW1 
KingdomBacteria 
Replicon accessionNC_009511 
Strand
Start bp3208075 
End bp3209610 
Gene Length1536 bp 
Protein Length511 aa 
Translation table11 
GC content70% 
IMG OID640582472 
Productamidohydrolase 
Protein accessionYP_001263412 
Protein GI148555830 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG1228] Imidazolonepropionase and related amidohydrolases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.802626 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATGATCA TCCTGATATC CCATTTGCGC ATGATGGCAA GGCCGACCAT AATCGCGCCA 
GGACATTTCC AGCCGGATGA GACGATGAAA GCTTTCCTGA TCGCACTGAC CGCGGCGGCG
GCGTTCCAAC CGATCCCGGC GGCCGCCGCG AGGCAGGCCG CCGACCTGCT GATCCGCCAC
GCGGTGGTGA TTGACGTCGA GGGCGCCCGG CCGATCCCCG ACCAGGCGGT GGCGATCAAG
GGCGACCGCA TCGTCGCGGT CGGCGGCGAC GCGGCGGTGG CCAGGGCGTG GAGCGCCCCC
CGGCGGATCG AGGCGAAGGG CCGCTACCTG ATCCCCGGCC TGTGGGACAT GCACGTCCAT
TTCGGCGGCG GCCCGGCGCT GGTCGACGAG AACAGGGCGC TGCTGCCGCT TTACGTCGCC
TATGGCATCA CCACCGTGCG CGACGCGTCG GGCGACCTGC CGAACGAGGT GCTGCACTGG
CGCCGCGAGA TCGCCGACGG CACGCTGTTC GGGCCGACCC TGCTCAGCTC GGGGCCCAAG
ATCGAGGGGA TCAAGCCGGT CTGGAAGGGC ACGCTCGAAA CCGGCTCGGA AGCCGATGTC
GACGCGGCGG TCGCCAAGCT GGTCGGACTC GGCGTCGACT TCGTCAAGAT CACCGACAGC
ACCCTCGAGC CCGGTCTGTT CCTCTACGCC GTCCGCCGGG TGCGCGCGGC GGGGCTGCGC
GCCTCGGGTC ATATCCCGAT GGCGCTGACG GTCGGCCAGG CGGTCGATGC CGGGATCAGC
TCGATCGAGC ATCTCAGCTA TGCCTACAAG GCCGGCGTGA AGGACGAGGC GGCGATCGCC
GCAGATTTCG CCGCCGGCCG CATCACCCGC GCCGAGGCGC AGGCGCGGCT CGACGCCGAC
TTCGACGAAG CGACCGCGAT GGCCGCCTAT CGGACGCTGC GCGACCGCCG GGTGTTCGTC
ACGCCGACCC TCAACATCGA ACGGACGCTC GCCTTCCTCG ACAGCGACGA TCATTCGAAG
GACCCGTTCC TCGCCTATGT CGGGCCGGGG CTGCGCAAGA CCTATCAGTG GCGGATCGAT
CGCGCCGCCA GGGCGACCCC CGAACAGGTC GAGGCCCGCC ACCGCGAATA TCGCCAGACC
GCCGCCGTGC TGCCGATGCT GGCGAAGGCC GGGGTGACGA TCATGGCCGG CACCGACGCC
GGCTTCCTCA ATTCGTTCGA CTATCCCGCG CTCGGCCTGC ACCAGGAACT GGCGCTCTAT
GTCGAGAACG GGCTGACCCC GGCGCAGGCG CTGTCGGCCG CGACCCGCGC CGGCCCGGCC
TGGTTCGGCA AGCTCGACCG CTACGGCTCG GTCGAGGCGG GCAAGCAGGC CGACCTGGTG
CTGCTCGACC GCAACCCGCT CGAGGACATC CACGCGACCC AGTCTGTCGA CACGGTGGTG
CTGCGCGGGA CGGTGCAGGA TCGCGCCGCG CTCGACCGGC TGCTCGCCGA GGCGCGGGCG
AAGGTCGCGC GCTGGGACGC CGAGGCCGGG CAGTGA
 
Protein sequence
MMIILISHLR MMARPTIIAP GHFQPDETMK AFLIALTAAA AFQPIPAAAA RQAADLLIRH 
AVVIDVEGAR PIPDQAVAIK GDRIVAVGGD AAVARAWSAP RRIEAKGRYL IPGLWDMHVH
FGGGPALVDE NRALLPLYVA YGITTVRDAS GDLPNEVLHW RREIADGTLF GPTLLSSGPK
IEGIKPVWKG TLETGSEADV DAAVAKLVGL GVDFVKITDS TLEPGLFLYA VRRVRAAGLR
ASGHIPMALT VGQAVDAGIS SIEHLSYAYK AGVKDEAAIA ADFAAGRITR AEAQARLDAD
FDEATAMAAY RTLRDRRVFV TPTLNIERTL AFLDSDDHSK DPFLAYVGPG LRKTYQWRID
RAARATPEQV EARHREYRQT AAVLPMLAKA GVTIMAGTDA GFLNSFDYPA LGLHQELALY
VENGLTPAQA LSAATRAGPA WFGKLDRYGS VEAGKQADLV LLDRNPLEDI HATQSVDTVV
LRGTVQDRAA LDRLLAEARA KVARWDAEAG Q