| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_2921 |
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| Symbol | |
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| ID | 5199289 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | - |
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| Start bp | 3207202 |
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| End bp | 3208053 |
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| Gene Length | 852 bp |
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| Protein Length | 283 aa |
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| Translation table | 11 |
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| GC content | 74% |
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| IMG OID | 640582471 |
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| Product | LysR family transcriptional regulator |
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| Protein accession | YP_001263411 |
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| Protein GI | 148555829 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 42 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.739146 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTCGATC CCCGCCTGCT CCGCGCCTTC GTGGCGATCG CCGACCATCG CAGCTTCACC
GGCGCGGCGA CGGCGCTCAA CATGACCCAG TCGACGATCA GCCAGCAGCT CGCCCGGCTC
GAACAGGGCA TCGGCGGCGC CCTGGTCGAC CGCGCCGCGC GGCCGGTGCT GCCGACCCCG
GCGGGCGAGC GGCTGCTCGG CCATGCCCGC CGCATCCTCG CGCTGCACGA CGAGGCGGAG
CGGCTGCTGA CCGACCCGGC CGGCACCCAT CCGGTGCGGA TCGGCATGCC CGACGACATC
GCCAGCCACG CGATGACCGG GGCGCTCGCC GCCTTCGCCG GGCAGCATCG CGACATCCGG
CTCGACGTGA CGATCGGCCT CAGCCGCGAG CTGACCCGCC GCTACCATGG CGGCGAACTC
GACATCGTCG TGGTCAAGGA GGCGAGGCCC GGACCCGACC ACCGCATCAG CTTCGCCGAG
CCGATGGCCT GGTACGAAGG CAGCGCCGCG CCCGACTGGC CCGACCCGAT CCCGCTGGTC
GCCTTCCCGG CCGGCGGCCT CTACCGCGAC GAGATGTTCG CGCGGATCGA GCGCGAGGGG
CGCCGCTGGT ATGTCGCGCT GACGTCGAGC AGCCTGTCGA GCGTGCTGGT CGCGGTCGAG
ACGGGCATGG GGATATCGCT GCTCCCCTGC CGCTCGACGC TGGGCCGCGA CCTGCGCATC
CACGCGCCGC TGGGGCGCGA GCAGCCGATG GCGGTATCGC TCTACGGCTG GGAGACGGCG
GGGCCGGTCG GCGAGCTGGC CGAGCGGATG ATCGCGGTCC TCGCCGGCCG CGACGGGGCG
GCCGGCGGAT AG
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| Protein sequence | MLDPRLLRAF VAIADHRSFT GAATALNMTQ STISQQLARL EQGIGGALVD RAARPVLPTP
AGERLLGHAR RILALHDEAE RLLTDPAGTH PVRIGMPDDI ASHAMTGALA AFAGQHRDIR
LDVTIGLSRE LTRRYHGGEL DIVVVKEARP GPDHRISFAE PMAWYEGSAA PDWPDPIPLV
AFPAGGLYRD EMFARIEREG RRWYVALTSS SLSSVLVAVE TGMGISLLPC RSTLGRDLRI
HAPLGREQPM AVSLYGWETA GPVGELAERM IAVLAGRDGA AGG
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