Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swit_2911 |
Symbol | |
ID | 5198175 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sphingomonas wittichii RW1 |
Kingdom | Bacteria |
Replicon accession | NC_009511 |
Strand | - |
Start bp | 3198164 |
End bp | 3198988 |
Gene Length | 825 bp |
Protein Length | 274 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 640582461 |
Product | 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase |
Protein accession | YP_001263401 |
Protein GI | 148555819 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG2171] Tetrahydrodipicolinate N-succinyltransferase |
TIGRFAM ID | [TIGR00965] 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 34 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.718731 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAGCGGCG ATCTGCAGAC GATCATCGAG AAGGCCTGGG ACGAGCGCGA GGGCGTCACC TTCTCGACCA AAGGCGAGGT GCGCGACGCG GTCGAGAGCG CGCTCGGCCT GCTCGATTCG GGCGCGCGGC GCGTCGCCGA GAAGGGCGCT GAAGGCTGGA CCGTCAACCA GTGGCTCAAG AAGGCGGTGC TGCTCTCCTT CCGCCTCAAC GACATGGAAC TGATCCCCGG CGGCCCCGGC GGCGCGAGCT GGTGGGACAA GGTCCCGTCG AAGTTCGCCG CATGGGGCGA GGCCGAGTAT CGCGCCGCCG GCTTCCGCGC GGTGCCGGGA TCGATCGTCC GCCGCGGCGC GCACATCGCC AGGGGCGCGG TGCTGATGCC GAGCTTCGTC AACCTCGGCG CCTATGTCGG CGAGAACACG ATGGTCGACA CCTGGGCGAC GGTCGGCAGC TGCGCGCAGA TCGGCAGCAA CGTCCACCTG TCGGGCGGCG TCGGCATCGG CGGCGTGCTC GAGCCGCTCC AGGCCGGCCC GGTGGTGATC GAGGACGACT GCTTCATCGG CGCCCGTTCC GAGGTCGCCG AGGGCGTGGT GGTCGAGCAG GGCGCGGTGC TGTCGATGGG CGTCTATCTC GGCGCCTCGA CCAAGATCGT CGACCGCGCC ACCGGCGAGG TCTTCGTCGG CCGCGTGCCG AGCTATGCGG TGGTCGTCCC GGGCACCTTG CCCGGCAAGG ACGGCGGCCC GGGCCTCTAC TGCGCCGTGA TCGTCAAGCG CGTCGACGCG CAGACCCGGT CGAAGACGGG GATCAACGAG CTGCTGCGGG ATTGA
|
Protein sequence | MSGDLQTIIE KAWDEREGVT FSTKGEVRDA VESALGLLDS GARRVAEKGA EGWTVNQWLK KAVLLSFRLN DMELIPGGPG GASWWDKVPS KFAAWGEAEY RAAGFRAVPG SIVRRGAHIA RGAVLMPSFV NLGAYVGENT MVDTWATVGS CAQIGSNVHL SGGVGIGGVL EPLQAGPVVI EDDCFIGARS EVAEGVVVEQ GAVLSMGVYL GASTKIVDRA TGEVFVGRVP SYAVVVPGTL PGKDGGPGLY CAVIVKRVDA QTRSKTGINE LLRD
|
| |