Gene Swit_2906 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwit_2906 
Symbol 
ID5199200 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingomonas wittichii RW1 
KingdomBacteria 
Replicon accessionNC_009511 
Strand
Start bp3192346 
End bp3193122 
Gene Length777 bp 
Protein Length258 aa 
Translation table11 
GC content69% 
IMG OID640582456 
ProductABC transporter related 
Protein accessionYP_001263396 
Protein GI148555814 
COG category[R] General function prediction only 
COG ID[COG1137] ABC-type (unclassified) transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value0.20972 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACGACA CCGCCACGCT CGAACGCCCC GCCGGTCCCG ACGGCACCGG TGCCGTGCGC 
GGCCTGTCGG TCGTGTCGAT CGCCAAGACC TACGACAAGC GGCAGGTGCT GACCGACATC
TCGCTCGACG TCGCGCGCGG GGAGGTGGTC GGCCTGCTCG GCCCCAACGG CGCGGGCAAG
ACGACCTGCT TCTATTCGGT GATGGGGCTG GTCAAGCCCG ACGCTGGCCG CATCCTGCTC
GACGGCGACG ACATCACCAC CCTGCCGATG TACCGCCGCG CGATCCTCGG CCTCGGCTAT
CTGCCGCAGG AGACCTCGAT CTTCCGCGGC CTGACGGTCA GCCAGAACAT CATGGCGGTG
CTCGAGCTGG TCGAGCCCGA CAAGGCGCAG CGCACCCAGC GGCTCGATTC GCTGCTCGGC
GAATTCCACC TCGACCATCT CCGCGATTCG GCGGCGATGG CGCTGTCGGG CGGCGAGCGG
CGGCGCTGCG AGATCGCCCG CGCGCTGGCC GCCGACCCGT CGATCATGCT GCTCGACGAG
CCGTTCGCCG GGATCGACCC GATCTCGATC TCCGACATCC GCGAGCTGGT CCGCGACCTC
AAGCGCCGCG ACATCGGCGT GCTGATCACC GACCATAATG TCCGCGAGAC GCTCGACATC
GTCGACCGCG CCTGCATCAT CTACGACGGC AAGGTGCTGT TCCAGGGCAG CCCCGCCGCG
CTGGTCGCCG ACCCGAACGT CCGCCGTCTC TATCTGGGCG AGGGCTTCTC GCTCTGA
 
Protein sequence
MNDTATLERP AGPDGTGAVR GLSVVSIAKT YDKRQVLTDI SLDVARGEVV GLLGPNGAGK 
TTCFYSVMGL VKPDAGRILL DGDDITTLPM YRRAILGLGY LPQETSIFRG LTVSQNIMAV
LELVEPDKAQ RTQRLDSLLG EFHLDHLRDS AAMALSGGER RRCEIARALA ADPSIMLLDE
PFAGIDPISI SDIRELVRDL KRRDIGVLIT DHNVRETLDI VDRACIIYDG KVLFQGSPAA
LVADPNVRRL YLGEGFSL