Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swit_2906 |
Symbol | |
ID | 5199200 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sphingomonas wittichii RW1 |
Kingdom | Bacteria |
Replicon accession | NC_009511 |
Strand | + |
Start bp | 3192346 |
End bp | 3193122 |
Gene Length | 777 bp |
Protein Length | 258 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 640582456 |
Product | ABC transporter related |
Protein accession | YP_001263396 |
Protein GI | 148555814 |
COG category | [R] General function prediction only |
COG ID | [COG1137] ABC-type (unclassified) transport system, ATPase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 0.20972 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACGACA CCGCCACGCT CGAACGCCCC GCCGGTCCCG ACGGCACCGG TGCCGTGCGC GGCCTGTCGG TCGTGTCGAT CGCCAAGACC TACGACAAGC GGCAGGTGCT GACCGACATC TCGCTCGACG TCGCGCGCGG GGAGGTGGTC GGCCTGCTCG GCCCCAACGG CGCGGGCAAG ACGACCTGCT TCTATTCGGT GATGGGGCTG GTCAAGCCCG ACGCTGGCCG CATCCTGCTC GACGGCGACG ACATCACCAC CCTGCCGATG TACCGCCGCG CGATCCTCGG CCTCGGCTAT CTGCCGCAGG AGACCTCGAT CTTCCGCGGC CTGACGGTCA GCCAGAACAT CATGGCGGTG CTCGAGCTGG TCGAGCCCGA CAAGGCGCAG CGCACCCAGC GGCTCGATTC GCTGCTCGGC GAATTCCACC TCGACCATCT CCGCGATTCG GCGGCGATGG CGCTGTCGGG CGGCGAGCGG CGGCGCTGCG AGATCGCCCG CGCGCTGGCC GCCGACCCGT CGATCATGCT GCTCGACGAG CCGTTCGCCG GGATCGACCC GATCTCGATC TCCGACATCC GCGAGCTGGT CCGCGACCTC AAGCGCCGCG ACATCGGCGT GCTGATCACC GACCATAATG TCCGCGAGAC GCTCGACATC GTCGACCGCG CCTGCATCAT CTACGACGGC AAGGTGCTGT TCCAGGGCAG CCCCGCCGCG CTGGTCGCCG ACCCGAACGT CCGCCGTCTC TATCTGGGCG AGGGCTTCTC GCTCTGA
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Protein sequence | MNDTATLERP AGPDGTGAVR GLSVVSIAKT YDKRQVLTDI SLDVARGEVV GLLGPNGAGK TTCFYSVMGL VKPDAGRILL DGDDITTLPM YRRAILGLGY LPQETSIFRG LTVSQNIMAV LELVEPDKAQ RTQRLDSLLG EFHLDHLRDS AAMALSGGER RRCEIARALA ADPSIMLLDE PFAGIDPISI SDIRELVRDL KRRDIGVLIT DHNVRETLDI VDRACIIYDG KVLFQGSPAA LVADPNVRRL YLGEGFSL
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