| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_2899 |
|---|
| Symbol | |
|---|
| ID | 5200899 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sphingomonas wittichii RW1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009511 |
|---|
| Strand | - |
|---|
| Start bp | 3186190 |
|---|
| End bp | 3187338 |
|---|
| Gene Length | 1149 bp |
|---|
| Protein Length | 382 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 73% |
|---|
| IMG OID | 640582449 |
|---|
| Product | putative iron-sulfur cluster binding protein |
|---|
| Protein accession | YP_001263389 |
|---|
| Protein GI | 148555807 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1600] Uncharacterized Fe-S protein |
|---|
| TIGRFAM ID | [TIGR00276] iron-sulfur cluster binding protein, putative |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 33 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 11 |
|---|
| Fosmid unclonability p-value | 0.281494 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCGACG ACCCCATCTC CCTGCGCGAG GCGATCCGCG ACGAGGCGCT GAAGCTCGGC
TTCGCGACCT GCGGCTTCGC GCGCGCCGAC GCCGCGCCCG AGAGCGCGGC CCGGCTCGAC
CAGTGGCTGG CGACGGGCGC GCATGGGTCG ATGGAGTGGA TGGAGGCGCG CAAGGGCGAG
CGGGCGCGGC CGCAGGGGTT GTGGCCCGAG GCGCGCAGCC TGATCATGCT CGGCATGAGC
TACGCCCCGC GCGAGGACCC GATGCGGCTG GCCGACGCGC CCGGCATCGG CCGCATCTCG
GTCTATGCGC AGGGCACCGA CTATCACGAC GTCGTCAAGA AGGCGCTCAA GCATCTCGCC
CGCTGGCTGG TCGACCGGGC GGGCGGCGCG CTGAAAGTGT TCGTCGACAC CGCGCCGGTG
ATGGAGAAGC CGCTGTCGGC GGCGGCCGGG ATCGGCTGGC AGGGCAAGCA CAGCAACCTC
GTCTCGCGCG AGCATGGCAG CTGGCTGTTC CTCGGCGCGA TCATGACCAG CCTCGACCTG
CCCCCCGACG ATCCGCACGA CGATCGCTGC GGCAGCTGCT CCGCCTGCCA GGCCGCCTGC
CCGACCGACG CCTTCCCGCG CCCCTATGTC GTCGATGCGC GGCGCTGCAT CTCCTATCTG
ACGATCGAGC ATAAGGGGCC GATCCCGGCC GAGTTCCGCG CGCCGATCGG CAACCGCATC
TATGGCTGCG ACGATTGCCT GGCGGTCTGC CCGTGGAACA AGTTCGCCGA GGCCGCCGCG
GCCAACCGCG CCTTCGCCGC GCGCGCCGAG CTCGCCGCGC CCGAGCTGGA GGACCTGCTC
GGCCTCGACG ATGCCGGCTT CCGCGCGGTG TTCGCGGGAT CGCCGATCAA GCGGATCGGA
CGCGACCGGA TGCTGCGCAA CGCGCTGGTC GCCGCCGGCA ACAGCGGGCT GGCGGCGCTG
CTGCCGCCGG TCGTGGCGCT GCTCGACGAC CCCGCGCCGG TGGTGCGCGG CGCCGCCGTC
TGGGCGCTCG GCCGGCTCGA TCCCGCCGGT TTCGCCGCCG AGCGGGCGGC GCGCCTGGCC
TGTGAAAAGG ACGAGGCCGT CGCCGCCGAA TGGGACGCGG AGATTGCGGC CGCGCCCGCC
GCCCGATAA
|
|---|
| Protein sequence | MTDDPISLRE AIRDEALKLG FATCGFARAD AAPESAARLD QWLATGAHGS MEWMEARKGE
RARPQGLWPE ARSLIMLGMS YAPREDPMRL ADAPGIGRIS VYAQGTDYHD VVKKALKHLA
RWLVDRAGGA LKVFVDTAPV MEKPLSAAAG IGWQGKHSNL VSREHGSWLF LGAIMTSLDL
PPDDPHDDRC GSCSACQAAC PTDAFPRPYV VDARRCISYL TIEHKGPIPA EFRAPIGNRI
YGCDDCLAVC PWNKFAEAAA ANRAFAARAE LAAPELEDLL GLDDAGFRAV FAGSPIKRIG
RDRMLRNALV AAGNSGLAAL LPPVVALLDD PAPVVRGAAV WALGRLDPAG FAAERAARLA
CEKDEAVAAE WDAEIAAAPA AR
|
|---|
| |