| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_2883 |
|---|
| Symbol | |
|---|
| ID | 5196162 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sphingomonas wittichii RW1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009511 |
|---|
| Strand | - |
|---|
| Start bp | 3166353 |
|---|
| End bp | 3167024 |
|---|
| Gene Length | 672 bp |
|---|
| Protein Length | 223 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 640582433 |
|---|
| Product | glutathione S-transferase domain-containing protein |
|---|
| Protein accession | YP_001263373 |
|---|
| Protein GI | 148555791 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG0625] Glutathione S-transferase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 30 |
|---|
| Plasmid unclonability p-value | 0.527212 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 11 |
|---|
| Fosmid unclonability p-value | 0.219041 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCGATCG ACCAGAACGC CGCCATCGAG ATCACCGGCT TCGCCTGGGT GCCCGATTTC
GCCCGCGGCT TCGTCCGTGA CCTGCGGCCG CGCTGGGCTT GCGAGGAGGC CGGGCTCGGC
TATCGCGAGC GGCTGATCGG CTTCGAGACG GCGAAGGGCG CGGACTATCG CCGCGAGCAG
CCGTTCGGCC AGGTCCCCGC CTATCGCGAC GAGGAGGTGC AGATGTTCGA GAGCGGCGCG
ATGGTGCTGC GCATCGCCGA GCGTTGCGAG CGGCTGATGC CGCGCACCGC GCAGGGCCGC
GCCCGGGTGC TGACCTGGGT GACGGCGGCG CTCAACAGCG TCGAGCCGTT CGTCTTCGAC
CTCGTCAATA TCGACACCTT CAACCCCGAC GCCGAATGGG GCCGCCTGCG CCGCCCGCAG
GTGATCGAGA CGCTGCGCGG ACGACTCGCC GCGCTCGCCG GCTGGCTTGG CGACAAGGAC
TATCTGGAGG GCGACTTCAC CGCCGCCGAC ATCGTCATGG CGACGGTGCT GCGCGAGGTG
TCCGACGATG CGCTGATGGC CGAATTCCCG ACCCTCGCCG CCTATCGCGA CCGCTGCACC
GCGCGGCCGG CCTTCCAGGC GGCGCATGCC GCCCAGCTCG CCTCCTTCGC GGCGGAGCCG
GTGCCCGCCT GA
|
|---|
| Protein sequence | MPIDQNAAIE ITGFAWVPDF ARGFVRDLRP RWACEEAGLG YRERLIGFET AKGADYRREQ
PFGQVPAYRD EEVQMFESGA MVLRIAERCE RLMPRTAQGR ARVLTWVTAA LNSVEPFVFD
LVNIDTFNPD AEWGRLRRPQ VIETLRGRLA ALAGWLGDKD YLEGDFTAAD IVMATVLREV
SDDALMAEFP TLAAYRDRCT ARPAFQAAHA AQLASFAAEP VPA
|
|---|
| |