Gene Swit_2872 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwit_2872 
Symbol 
ID5196730 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingomonas wittichii RW1 
KingdomBacteria 
Replicon accessionNC_009511 
Strand
Start bp3151451 
End bp3152365 
Gene Length915 bp 
Protein Length304 aa 
Translation table11 
GC content73% 
IMG OID640582422 
Productbifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase 
Protein accessionYP_001263362 
Protein GI148555780 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0190] 5,10-methylene-tetrahydrofolate dehydrogenase/Methenyl tetrahydrofolate cyclohydrolase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0451182 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAACGGG TGGGCATGAA CGGGGCTGAG ATCATCGACG GCAAGGCCTA TGCGGCGGGC 
TTGCGCGCCC GGGTCGCCAC GGCGGTCCCG GCCTTCCGCG TCGCCGCCGG CCGCGCGCCC
GGCCTCGCCG TGGTGCTGGT CGGCGAGGAC GCGGCGAGCC AAGTCTATGT CCGCTCGAAG
CACAAGGCGA CCGTCGAGGC GGGGATGGAG AGCTTCGAGC ACCGCCTGCC GGCGACCGCG
AGCGAGACGG AGCTGCTCGC CCTGGTCGAG CGGCTCAACG CCGACGACCG GGTCGACGGC
ATCCTCGTCC AGCTGCCGCT GCCGCCGCAC ATCGACGAGA AAAAGGTGAT CGCGACGATC
GATCCCGACA AGGACGTCGA CGGCTTCCAC GTCGTCAACG CCGGGCGGCT GGCGGTGGGC
GAGGCGGGCT ATGTGCCGTG CACCCCGCTC GGCTGCCTGA TGCTGCTCAA GGACCGGCGC
GGCGACCTGT CGGGGCTGGA GGCGGTGGTG ATCGGCCGCT CGAACATCGT CGGCAAGCCG
ATGGCGGCGC TGCTGCTCGC CGAGAATTGC ACGGTGACGA TCGCGCACAG CCGCACCCGC
GACCTGGCCG AGGTGGTGCG CCGCGCCGAT ATCGTCGTCG CGGCGGTCGG CCGGCCCGAG
ATGGTCAGGG GCGACTGGAT TCGCCCCGGC GCGACGGTGA TCGACGTCGG CATCAACCGC
GTGCCGGGCG CCGAGCCGGG CAAGACCCGG CTGGTCGGCG ATGTCGCCTT CGCCGAGGCG
GCGGCGGTCG CTGGCGCGAT CACCCCGGTC CCCGGCGGGG TCGGGCCGAT GACGATCGCG
GTGCTGCTGC GCAACACGCT GGTCGCCGCG CACCGCCGCG CCGGCGTCGC GCTGCCGGAG
GGCGCGATCG GATGA
 
Protein sequence
MERVGMNGAE IIDGKAYAAG LRARVATAVP AFRVAAGRAP GLAVVLVGED AASQVYVRSK 
HKATVEAGME SFEHRLPATA SETELLALVE RLNADDRVDG ILVQLPLPPH IDEKKVIATI
DPDKDVDGFH VVNAGRLAVG EAGYVPCTPL GCLMLLKDRR GDLSGLEAVV IGRSNIVGKP
MAALLLAENC TVTIAHSRTR DLAEVVRRAD IVVAAVGRPE MVRGDWIRPG ATVIDVGINR
VPGAEPGKTR LVGDVAFAEA AAVAGAITPV PGGVGPMTIA VLLRNTLVAA HRRAGVALPE
GAIG