Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swit_2868 |
Symbol | |
ID | 5199751 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sphingomonas wittichii RW1 |
Kingdom | Bacteria |
Replicon accession | NC_009511 |
Strand | + |
Start bp | 3148925 |
End bp | 3150001 |
Gene Length | 1077 bp |
Protein Length | 358 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 640582418 |
Product | hypothetical protein |
Protein accession | YP_001263358 |
Protein GI | 148555776 |
COG category | [R] General function prediction only |
COG ID | [COG0628] Predicted permease |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 0.838475 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.0422213 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGAGCGAAT CCGAAGAACC GCGGCGTTTC CGTTTCGAGG ACGGCAGCTT CCTCGCCCTC GTCCTGATCG TCACGGTTGC TTTCGCGATG GTGATCGCGC CCTTCTTCGG CGCGATCCTC TGGGGGCTCG TCCTCGCGCT GATGTTCAGC CCGGTCCACC GCCGCATCCT CGACCGGATG CCGGGCCGCT CGAACGTCGC GGCGCTGATC ACCCTGCTGA TCATCATCCT GATCGTGATC CTGCCCGCCG CCTTCCTCGG ATCGGCGATG ATCCAGGAAT TCCTGCATGT CTACGCGATG GTCCAGTCGG GCCAGATCGA CATCGCCCGG ATGTTCGAGC AGATGACCGG CGCGCTGCCC GACTGGGCGT CCCATTGGCT GGCGGCGCGC GGCCTGACCG ATTTCGCCGC CGCGCGGCAA CAGATCAGTG AGACGCTCAG CGGCAGCTTC AGCGCGATCG CCGCCCATGC GCTGCAGGTC GGGCAGGGGG CGCTCAACCT CGTCCTGATG CTGGGCGTGA TGCTCTACCT GACCTTCTTC CTGATCCGCG ACGGCGAGGA ACTGGCGCGC CGGGTGATCG AATCGATCCC GCTCGATCCC GACCGGCGGC GCGCGGTGAT CCGCAACTTC ACCGTCGTCA CCCGCGCGAC GATCAAGGGC AGCCTGATCG TCGCGATCGT CCAGGGCTTC ACCGGCGGCG TCACCTTCGC GCTGCTCGGC ATCGAAGGGG CGCTGCTGTG GGGGACGATG ATGGCGATCT TCTCGCTGAT CCCGGCGATC GGCTGCGGCA TCGTCTGGGT GCCGGTCGCG CTCTACCTGT TCGCCACCGG CGCGGTGGTG AAGGGGATCA TCCTGGTCGT CGCGGGTGCG CTGGTGATCG GATCGATCGA CAATGTGCTG CGCCCGCTGC TGGTCGGCCG CGACACCCGC ATGCCCGATT ATGTCGTGCT GATCTCGACG CTGGGCGGGC TCCAGCTCTT CGGTTTCCAC GGCTTCATCG TCGGGCCGGT GGTCGCTGCG TTGTTCATCG GCACCTGGAA CATCGTCACC GAGCAGCGCC GCGCCGCGAG CCGCTGA
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Protein sequence | MSESEEPRRF RFEDGSFLAL VLIVTVAFAM VIAPFFGAIL WGLVLALMFS PVHRRILDRM PGRSNVAALI TLLIIILIVI LPAAFLGSAM IQEFLHVYAM VQSGQIDIAR MFEQMTGALP DWASHWLAAR GLTDFAAARQ QISETLSGSF SAIAAHALQV GQGALNLVLM LGVMLYLTFF LIRDGEELAR RVIESIPLDP DRRRAVIRNF TVVTRATIKG SLIVAIVQGF TGGVTFALLG IEGALLWGTM MAIFSLIPAI GCGIVWVPVA LYLFATGAVV KGIILVVAGA LVIGSIDNVL RPLLVGRDTR MPDYVVLIST LGGLQLFGFH GFIVGPVVAA LFIGTWNIVT EQRRAASR
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