Gene Swit_2858 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwit_2858 
Symbol 
ID5199438 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingomonas wittichii RW1 
KingdomBacteria 
Replicon accessionNC_009511 
Strand
Start bp3139999 
End bp3140916 
Gene Length918 bp 
Protein Length305 aa 
Translation table11 
GC content69% 
IMG OID640582409 
ProductMg2+ transporter protein, CorA family protein 
Protein accessionYP_001263349 
Protein GI148555767 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0598] Mg2+ and Co2+ transporters 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.0228802 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0235683 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGCCGG GCTGGACCAT CGGGCAGGAA GGCGCGGGGC AGTTCCGCTG GATCCATCTC 
GACGGGCGCG ACGCGCAGGC GATGTGCTGG CTGGACGACG AATCGCACGG GCTGCCGCCG
ACGGCGCGGT TCAACCTGAC CACCGCCGAG ACCCGGCCGC GCTGCCAGCC GCTCCATGAC
GGGGTGATCA TCAACCTGCG CGGGCCACGC CACGGCGACG AGCAGGACGA GGGCGACGAG
CTGGTCTCGA TCCGCATCTG GGCCGAGCGC GGGCGGCTGG TGTCGGTCAG CTATCGCCGG
ATGGCGGGGC TGGAGGACCT GCGCGACCGG ATGGACAAGG GCGAGTTCCT CGACCCCGGC
GACCTGATCG CGGCGCTGGC GGTGCAGATC GCCCGCCATC TCGATCCGGT GGTCGCCGAC
CTGGGCGACC AGGTCGACGA TTGCGAGCTG GCCTTGTCGT CCGAGACCTT CCACCTGCGC
CGCCACATCG CCAAGGCGCG CTCGACCGCG ATCAGCTATC GCCGTTTCAT CGTGCCGCAG
CGCCAGGCGC TCGAGGCGAT GGCGCTGCTC GAACTCGACT GGATCGAGGA CGACGACCGC
ATCCACCTGC GCGAAGCCGC CGACCGCTTC GCGCGCATGG CCGAGGAGCT GGAGGCGGTG
CGCGAGCGAT CGGCGTTGCT CCACGAGCAG ATCACCGACC TGCGCGCCGA GAAGATCGAC
CGCCGATCGC TGATCATCGC GATCGTCGCG ATGATCTTCC TGCCACTGAC CTTCGTCACC
GGCCTGTTCG GGATGAACGT CGACGGCATC CCCTATGCCC ATCACCCGCT ATCCTTCTGG
GCGGTGACGG GGTTCAGCCT GCTGGTCGGC ACCGGCGTGG CGCTGTGGTT CGCCGCGGCG
CGATGGTTCC GCAACTGA
 
Protein sequence
MTPGWTIGQE GAGQFRWIHL DGRDAQAMCW LDDESHGLPP TARFNLTTAE TRPRCQPLHD 
GVIINLRGPR HGDEQDEGDE LVSIRIWAER GRLVSVSYRR MAGLEDLRDR MDKGEFLDPG
DLIAALAVQI ARHLDPVVAD LGDQVDDCEL ALSSETFHLR RHIAKARSTA ISYRRFIVPQ
RQALEAMALL ELDWIEDDDR IHLREAADRF ARMAEELEAV RERSALLHEQ ITDLRAEKID
RRSLIIAIVA MIFLPLTFVT GLFGMNVDGI PYAHHPLSFW AVTGFSLLVG TGVALWFAAA
RWFRN