| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_2856 |
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| Symbol | |
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| ID | 5199320 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | + |
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| Start bp | 3137979 |
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| End bp | 3138644 |
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| Gene Length | 666 bp |
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| Protein Length | 221 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 640582407 |
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| Product | alanine racemase domain-containing protein |
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| Protein accession | YP_001263347 |
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| Protein GI | 148555765 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0325] Predicted enzyme with a TIM-barrel fold |
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| TIGRFAM ID | [TIGR00044] pyridoxal phosphate enzyme, YggS family |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.0170216 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.0492664 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCGATA TCGACACCGC TTCCCGCCGC CTCGCCGACA TCCGCGCGCG CATCGACCAT
GCCGCCGCGC TGGCCGACCG CGATCCTGCC GCGATCGAGC TGATCGCCAT CTCCAAGACC
AAGCCCGCCG AGGCGATCGC GCCGCTGATC GCCGCCGGCC AGATCGGCTT CGGCGAGAAC
CGGGTGCAGG AAGCCGAAAC GAAATGGCCC GCACTCAGGG AAGGGCCATC GCTCCGCCTC
CATCTGGTCG GGCAGCTCCA GTCGAACAAG GCGAAGGAAG CCGTCGCGCT GTTCGACGCG
ATCCATTCGG TCGACCGACC CTCGCTGATC GAAGCGCTGG CCAAGGCGAT GGACGGCGCG
AGGCGGCGGC CCGACTGCTT CATCCAGGTC AATATCGGCG CCGAGGAGCA GAAGGGCGGC
TGCGCGATCG ACGAGCTGCC CGCGATCCTG GCGCGGGCGC GCGACGCAGG GCTGCCGGTC
GCCGGACTGA TGGCGGTGCC CCCCGCCGAT GTCGAGCCCG CGCCCTATTT CGCGCTGCTC
GCCAAGCTGG CGAAGCGGCA CGGGCTCGCC GGGCTCAGCA TGGGCATGTC GGGCGACTTC
GAGACCGCGG TGATGCTGGG CGCCACCCAT GTCCGGATCG GCACCGCACT GTTCGGCCCG
CGCTGA
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| Protein sequence | MSDIDTASRR LADIRARIDH AAALADRDPA AIELIAISKT KPAEAIAPLI AAGQIGFGEN
RVQEAETKWP ALREGPSLRL HLVGQLQSNK AKEAVALFDA IHSVDRPSLI EALAKAMDGA
RRRPDCFIQV NIGAEEQKGG CAIDELPAIL ARARDAGLPV AGLMAVPPAD VEPAPYFALL
AKLAKRHGLA GLSMGMSGDF ETAVMLGATH VRIGTALFGP R
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