| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_2846 |
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| Symbol | |
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| ID | 5197435 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | + |
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| Start bp | 3127362 |
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| End bp | 3129221 |
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| Gene Length | 1860 bp |
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| Protein Length | 619 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 640582397 |
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| Product | tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA |
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| Protein accession | YP_001263337 |
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| Protein GI | 148555755 |
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| COG category | [D] Cell cycle control, cell division, chromosome partitioning |
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| COG ID | [COG0445] NAD/FAD-utilizing enzyme apparently involved in cell division |
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| TIGRFAM ID | [TIGR00136] glucose-inhibited division protein A |
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Plasmid Coverage information |
| Num covering plasmid clones | 38 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.125036 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCGGACA GCTTCGATGT GATCGTGGTC GGCGGCGGCC ATGCCGGCTG CGAGGCGGCG
GCGGCGGCGG CGCGGACGGG CGCGCGGACC GCGCTGGTCA GCATGCGTCG CGACATGATC
GGGGCGATGT CGTGCAACCC CGCGATCGGC GGCCTCGGCA AAGGCCATCT CGTCCGCGAG
GTCGATGCCT GCGACGGGCT GATCGCCCGC GCCGCCGATC GCGCCGCGAT CCATTATCGC
ATGCTCAACA GCAGCAAGGG CGCGGCGGTG CAGGGACCGC GCGTCCAGGC CGATCGTAAA
CTCTACAAGG CAGCGATCCA CGATCTGCTG GCCGAACTGC CTTCGCTGGA GATTGTCGAA
GGCTCCGCCG AACGGCTGCT GCTCGACGAT GTTTCACGTG GAACATCGGG GCTCGTTCTT
GCCGATGGGC GGGAACTGAA GGCGGGCGCG GTGGTGCTCG CGACCGGCAC CTTCCTCAAT
GCCCGGCTCC ATTTCGGGAT GGACTGCCGC ACCGGCGGCC GGGTGGGGGA GGCGGCGGCG
GTCGGACTCG CCGAACAGCT TCGCGCGCTC GACCTGCCGA TCGCCCGGCT CAAGACCGGC
ACCCCGCCGC GTCTCGATGG ACGGACGATC GACTGGGCCC GACTCGATCG CCAGCCTTCG
GATGGGGAGG GCTGGACCTT CTCGGCGCTC ACGCCTCACC GCCTCGTTCC GCAGCTCGCC
TGCGCGATCA CCCGGACCAA CCAGCGCACG CATGACGTGA TCCGCGCTGG GCTCGACCGG
TCGCCGCTCT TCTCGGGCGC GATCACCGGA GTGGGGCCGC GCTATTGCCC GTCGATCGAG
GACAAGGTCC ATCGCTTCGG CGATCGCGAC GGGCACCAGA TTTTTCTGGA GCCCGAAGGC
CTCGACGATC CCACCGTCTA TCCCAACGGC GTCTCGACTT CGTTGCCTGA GGACGTCCAG
CTTGCGATGC TGCGGACGGT GCCCGGCCTG GAACGGGTCG AGATCCTCCA ACCGGGCTAT
GCCGTCGAAT ATGATTATAT CGATCCGCGC GCGCTGACCG CCGGGCTGGC GTTGCGGGCG
CTGCCGGGCC TGTTCTGCGC GGGGCAGATC AACGGCACGA CCGGCTATGA GGAGGCCGCC
GCGCAGGGGC TTGCCGCCGG GATGAACGCC GCCGCCTTTG CCGCTGGCCG CCCCGAAATC
CATTTCGATC GCGCGACCAG CTATATCGGG GTGATGATTG ACGACCTCAC CCTGCAGGGC
GTTTCCGAAC CCTATCGGAT GCTCACCGCC CGCGCGGAGT ATCGGTTGCG GCTGCGCGCG
GACAATGCCG GCACACGGTT GACCAGCTGG GCCGACGCGC ACGGCGCGAT CTCGGCCGCG
CGGCGGATGT TCCACGTGGA ACGCGAGGCG AGGCGGATAG CGATGGCCGA TTGTCTCGAT
AGGCGCATCG CGGGATCGGC CGAGCTGATC GCTGCCGGCG CGGCGGTCGC CGCCGACCAC
GCCCGACGCT CGCTCACCGA GTGGCTGCGT TTCCCCGAGG TCGGCGACGC CGAGCTGACC
GTGCTGGCGC CTGAGCTTGT CGACGTCCCG GAGGATGTCC GCGCCGAGGT GATCCAGGAC
GGTCGCTACG CGCCCTATCT TGCCCGGCAG GATCAGGAGA TCGCCAGGCT GCGCGCCGAC
GAGCGAATCG GTCTCGCCGT GATCGTCGAT TATGGTGCGA TTGCGGGCCT GTCGAACGAG
ATGGTCGAGC GGCTCAACGC GGCGCGGCCC GCCGACCTTG CGGCGGCGGG ACGGGTGCGC
GGCGTCACCC CGGCCGCGCT CGCCGCGATC ATGGTCCACG CCCGGCGGCT CGCGGCATGA
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| Protein sequence | MADSFDVIVV GGGHAGCEAA AAAARTGART ALVSMRRDMI GAMSCNPAIG GLGKGHLVRE
VDACDGLIAR AADRAAIHYR MLNSSKGAAV QGPRVQADRK LYKAAIHDLL AELPSLEIVE
GSAERLLLDD VSRGTSGLVL ADGRELKAGA VVLATGTFLN ARLHFGMDCR TGGRVGEAAA
VGLAEQLRAL DLPIARLKTG TPPRLDGRTI DWARLDRQPS DGEGWTFSAL TPHRLVPQLA
CAITRTNQRT HDVIRAGLDR SPLFSGAITG VGPRYCPSIE DKVHRFGDRD GHQIFLEPEG
LDDPTVYPNG VSTSLPEDVQ LAMLRTVPGL ERVEILQPGY AVEYDYIDPR ALTAGLALRA
LPGLFCAGQI NGTTGYEEAA AQGLAAGMNA AAFAAGRPEI HFDRATSYIG VMIDDLTLQG
VSEPYRMLTA RAEYRLRLRA DNAGTRLTSW ADAHGAISAA RRMFHVEREA RRIAMADCLD
RRIAGSAELI AAGAAVAADH ARRSLTEWLR FPEVGDAELT VLAPELVDVP EDVRAEVIQD
GRYAPYLARQ DQEIARLRAD ERIGLAVIVD YGAIAGLSNE MVERLNAARP ADLAAAGRVR
GVTPAALAAI MVHARRLAA
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