Gene Swit_2839 details

Gene Information

• Locus tag: Swit_2839
• ID: 5197483
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Sphingomonas wittichii RW1
• Kingdom: Bacteria
• Replicon accession: NC_009511
• Strand: +
• Start bp: 3121309
• End bp: 3121959
• Gene Length: 651 bp
• Protein Length: 216 aa
• Translation table: 11
• GC content: 67%
• IMG OID: 640582390
• Product: integral membrane protein TerC
• Protein accession: YP_001263330
• Protein GI: 148555748
• COG category: [P] Inorganic ion transport and metabolism
• COG ID: [COG0861] Membrane protein TerC, possibly involved in tellurium resistance

Plasmid Coverage information

• Num covering plasmid clones: 35
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: 8
• Fosmid unclonability p-value: 0.0482245
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGATCGATC TCTGGAATCA CATCGTCGCG GATTTCTCCA ACATCACCAG CCCGGCGGCG 
ATGGCCGCCT TCGTGCAGGT GCTGATGATC GACATCATGC TGGCCGGCGA CAATGCGATC 
GTGGTCGGCG CGCTGGCGGC CGGGTTGCCC GCCGACCAGC GGCGCAAGGT GATCCTGATC 
GGCATCATCG CCGCGCTCGT CCTGCGCATC GTCTTCGCGG TCAGCGTCAG CCTGTTGATG 
GGCATCGTCG GGCTCGTCCT CGCGGGCGGC CTGCTGCTGC TCTGGGTGTC GTGGAAGATG 
TTCCGCGAGC TGCGCCACGC CGGCGCCCCG GCCGGCGCCG ACCCGACCGA GCATGACGGC 
ATCCCGCAGA GCAAGACCTT CCTCGGTGCC GCCTGGGCGG TCGCCGTCGC CGACGTGTCG 
ATGAGCCTCG ACAACGTCCT CGCGGTCGCC GGCGCGGCGC GCGAGCATCC CGGCATCCTC 
GTCATCGGCC TGCTGCTCTC GGTCGCGCTG ATGGGCATCG CCGCCAATCT GATCGCCCGC 
TATATCGAGC GCTATCGCTG GATCGCCTAT GTCGGCCTCG CGGTGATTCT CTACGTCGCG 
GTCAAGATGA TCTGGGAAGG CAGCCATCAG GTCTGGCCGC TGATCGCCTG A 

 

Protein sequence

MIDLWNHIVA DFSNITSPAA MAAFVQVLMI DIMLAGDNAI VVGALAAGLP ADQRRKVILI 
GIIAALVLRI VFAVSVSLLM GIVGLVLAGG LLLLWVSWKM FRELRHAGAP AGADPTEHDG 
IPQSKTFLGA AWAVAVADVS MSLDNVLAVA GAAREHPGIL VIGLLLSVAL MGIAANLIAR 
YIERYRWIAY VGLAVILYVA VKMIWEGSHQ VWPLIA