Gene Swit_2838 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwit_2838 
Symbol 
ID5197482 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingomonas wittichii RW1 
KingdomBacteria 
Replicon accessionNC_009511 
Strand
Start bp3120403 
End bp3121260 
Gene Length858 bp 
Protein Length285 aa 
Translation table11 
GC content74% 
IMG OID640582389 
Productmethyltransferase type 11 
Protein accessionYP_001263329 
Protein GI148555747 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG2226] Methylase involved in ubiquinone/menaquinone biosynthesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones38 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0925086 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTGACG CCGAAACGGT GCGCGCCGAG CAGCAGGCGT TGTGGAACGG GATCGCCGGC 
GCGGCCTGGG TCGACGAGCA GGTGCTGCTC GACCGGCTGT TCGCGCCGTT CGCGGCGATG
CTGGCCGAGG CGTCGCGCGA GGTTCGGGGC GGGCAGGTGC TCGACGTCGG CTGCGGGACC
GGCGCGACGA CGCTCGCCAT TGCCGGGGCG CTCGGCCCCG GCGGGGAATG CGTCGGCGCC
GATATCTCGG GCCCGATGAT CGGGCTTGCC CGCGCCCGCG CCGAGCGGGA AGGGGCGGCG
GCCCATTTCG TCCACGCCGA CGTCGAAAGC CACGGCTTCG CCCCGGCGAG CTTCGACCTC
GTCACTTCGC GCTTCGGGGT GATGTTCTTC GGCGATCCGG TGCGTGCCTT CGCCAATCTC
CGGCGTGCGG TGCGCGACGG CGGCGGGCTC GTCCTGCTCG TATGGCGCGG GACCGACGAG
AATGGCTTCA TGACCGCGGC CGAGCGCGCC GCCGCGCCGC TGCTGCCGCC GCAGCCCGCG
CGCGATCCCG ATGCGTCGGG CCAGTTCGCC TTCGCCGATC CCGATCGGGT GCATGCGATC
CTGACGGCGG CCGGCTGGAC CGGTGTCGAG ATCGCTCCGG TCGACGTCGA CTGCACCATG
TCCGATGCCG AGCTCGACGG CTATGTGGTC CGCCTCGGCG CGCTCGCCCG GGTCCTGCCG
ACCCTGGACG AGGCGCTGCG GGACCGCGTC GTCGCGGCCG TGCGCGCGGG CTTCGAACCC
TATCGCCGCG ACGGCCTGGT CCGCTTCACA GCGGCCTGCT GGATGATCCG CGTCCGCCCG
GCCCGTCCGA CGGGCTGA
 
Protein sequence
MTDAETVRAE QQALWNGIAG AAWVDEQVLL DRLFAPFAAM LAEASREVRG GQVLDVGCGT 
GATTLAIAGA LGPGGECVGA DISGPMIGLA RARAEREGAA AHFVHADVES HGFAPASFDL
VTSRFGVMFF GDPVRAFANL RRAVRDGGGL VLLVWRGTDE NGFMTAAERA AAPLLPPQPA
RDPDASGQFA FADPDRVHAI LTAAGWTGVE IAPVDVDCTM SDAELDGYVV RLGALARVLP
TLDEALRDRV VAAVRAGFEP YRRDGLVRFT AACWMIRVRP ARPTG