| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_2828 |
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| Symbol | |
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| ID | 5199173 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | - |
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| Start bp | 3111929 |
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| End bp | 3112633 |
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| Gene Length | 705 bp |
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| Protein Length | 234 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 640582379 |
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| Product | DNA polymerase III, epsilon subunit |
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| Protein accession | YP_001263319 |
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| Protein GI | 148555737 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0847] DNA polymerase III, epsilon subunit and related 3'-5' exonucleases |
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| TIGRFAM ID | [TIGR00573] exonuclease, DNA polymerase III, epsilon subunit family
[TIGR01406] DNA polymerase III, epsilon subunit, Proteobacterial |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 0.37287 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.103192 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCGTGAAA TCGTCTTCGA CACCGAAACA ACCGGCCTGA ACCCCGCCAC GGGCGATCGG
CTGGTCGAGA TAGGCTGCGT CGAACTGGTC AACCGGGTCG AGACCGGCAA CAGCTTCCAC
TGCTATTTCA ACCCGCAGCG ATCGATGCCG TTCGAGGCGG AGCAGGTCCA CGGCCTGTCC
GAACGCTTCC TGAGCGACAA GCCGCTGTTC GCCGACAAGG TCGAGGAGCT GCTCGCCTTC
ATCGGCGACG CGCCGCTGGT CGCGCATAAT GCCAGCTTCG ACTTCGGCTT CCTCAACTGG
GAACTGGGCG CCTGCGGCCG GTCGATCGTC GACATGGGCC GGATGGTCGA CACGCTGCAG
ATCGCCCGCA AGATGCACCC CGGCGCCAAG CACAGCCTCG ACGCGCTGTG CAGCCGCTAC
GGGATCGACC GCAGCCACCG CGTCAAGCAT GGCGCGCTGC TCGACGCGCA GCTCCTCGCC
CAGCTCTATG TCGAGCTGAC CGGCGGTCGC CAGATCGGCC TGTCGATGGG CGAGGCCGTG
GTCGAGGAGG TCGTCGTCGT CGCCACCCCG CGCGCGACGG TGGCGGCGAG CAGGACCATA
AGGGCGATCC GCCCCCATTT CGCAAGCGAG GAGGAACTGG AACGACACAA GGCTTTCGTT
GAGAAGCTCG ACGCGCCGCT CTGGCTGGAG GGTGCGACGG GCTGA
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| Protein sequence | MREIVFDTET TGLNPATGDR LVEIGCVELV NRVETGNSFH CYFNPQRSMP FEAEQVHGLS
ERFLSDKPLF ADKVEELLAF IGDAPLVAHN ASFDFGFLNW ELGACGRSIV DMGRMVDTLQ
IARKMHPGAK HSLDALCSRY GIDRSHRVKH GALLDAQLLA QLYVELTGGR QIGLSMGEAV
VEEVVVVATP RATVAASRTI RAIRPHFASE EELERHKAFV EKLDAPLWLE GATG
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