| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_2827 |
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| Symbol | |
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| ID | 5196333 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | - |
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| Start bp | 3111268 |
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| End bp | 3111849 |
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| Gene Length | 582 bp |
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| Protein Length | 193 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 640582378 |
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| Product | SSU ribosomal protein S30P |
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| Protein accession | YP_001263318 |
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| Protein GI | 148555736 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1544] Ribosome-associated protein Y (PSrp-1) |
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| TIGRFAM ID | [TIGR00741] ribosomal subunit interface protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 0.151976 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.0935289 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAAATTC GCGTTTCGGG ACATCAGGTT GATACGGGCA ACGCCCTCCG CACCCATGTC
GAGACCCGGC TCCACGCGAT CGCCGACAAA TTCTTCTCGC GAAGCCTGTC CGCGCATGTG
ACCTTCGGGC GCGGCCAGCA CGGCAACGGC TTTTCCTGCG ACATCGTCGC CCATGTCATG
CACGGCGTGA TCCTGAAGGG ATCGAGCCAG GCGATGGAAG CCCATCCCTG CTTCGACCAG
GCCGCCGACC GGATCGAGAC CCAGCTCCGC CGCTATATGA ACCGGCTCAA GTCGCGCACG
CCCGCGACGC CGCAGCTCGT CGACGCGATC GACGAGAATG CCGGCTACAC CGTGTTCGAG
GCGCCGGCCG AGGAGGAGGT GTCCGGCGAC AGCCCGGTGA TCATCGCCGA GACGCGGGTC
GACGTGCCCG ACGCCAGCGT GTCCGACGCG GTGATGATGC TGGACCTCCG AAATACGACC
GCGCTTCTCT TCCGAAATTC TGGTACGGGC GCCTTCAATA TGGTGTATCG GCGCACCGAC
GGCACGATCG GCTGGGTGGA GCCGAGCCGG GCGGCCGGAT AA
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| Protein sequence | MEIRVSGHQV DTGNALRTHV ETRLHAIADK FFSRSLSAHV TFGRGQHGNG FSCDIVAHVM
HGVILKGSSQ AMEAHPCFDQ AADRIETQLR RYMNRLKSRT PATPQLVDAI DENAGYTVFE
APAEEEVSGD SPVIIAETRV DVPDASVSDA VMMLDLRNTT ALLFRNSGTG AFNMVYRRTD
GTIGWVEPSR AAG
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