Gene Swit_2823 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwit_2823 
Symbol 
ID5196329 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingomonas wittichii RW1 
KingdomBacteria 
Replicon accessionNC_009511 
Strand
Start bp3109387 
End bp3109890 
Gene Length504 bp 
Protein Length167 aa 
Translation table11 
GC content71% 
IMG OID640582374 
Producthypothetical protein 
Protein accessionYP_001263314 
Protein GI148555732 
COG category[S] Function unknown 
COG ID[COG5321] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value0.198959 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0930467 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTCTATC CCAGACCCAT GGCCGGCGCC CCCGACTCGA TCGATTCGCT CGCCCCGATG 
GTCGCGACCG ACGTCGCGCG CGGGGTGGCG CGGATGTTCC TCCAGGCCGA GCTGACCCCG
CTGCCCGAGG TGCCGCTCGG CAATGGCCGG CGCGCCGACA TCATGGCGAT CGACGCCAAG
GGCTGCATCA CCATCGTCGA GATCAAGGTG TCGCGCGCCG ACCTGCTCGG CGACGCCAAA
TGGCCCTTCT ACCTCGACTA TTGCGACCGC TTCTTCTGGG CGGTGCCCGG CGGGTTCGAC
CTGGCGCCGT TCGGCACCGA CGCCTTCCGT CCCGACTGCT GCGGGCTGAT CGTCGCCGAC
CGCTACGAGG CCGCGGTCCT GCGCGAGCCG CTCCACCGCC CGCTGCCCGG CGCACGTCGC
AAGGCCGAAA CCCTCCGCTT CGCCCGCCGC GCCGCGCGCC GGCTGTGGGG CGACCTCGAC
CCGTTTCCGG AAAGCTGCGT GTAG
 
Protein sequence
MFYPRPMAGA PDSIDSLAPM VATDVARGVA RMFLQAELTP LPEVPLGNGR RADIMAIDAK 
GCITIVEIKV SRADLLGDAK WPFYLDYCDR FFWAVPGGFD LAPFGTDAFR PDCCGLIVAD
RYEAAVLREP LHRPLPGARR KAETLRFARR AARRLWGDLD PFPESCV