| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_2804 |
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| Symbol | |
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| ID | 5196405 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | - |
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| Start bp | 3093285 |
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| End bp | 3096110 |
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| Gene Length | 2826 bp |
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| Protein Length | 941 aa |
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| Translation table | 11 |
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| GC content | 74% |
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| IMG OID | 640582355 |
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| Product | membrane-like protein |
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| Protein accession | YP_001263295 |
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| Protein GI | 148555713 |
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| COG category | [S] Function unknown |
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| COG ID | [COG5373] Predicted membrane protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.195505 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATCCTGT GGGGACTGGT CGTCGGAGCC TTGTTCGGCC TGTTCGCCGC CGATTTCGAG
CAATATGGCA TGATCCTCGG CGCGATCGTC GGGGCCGGGG CCGGCTGGGG CCTGCGCGCG
GCGGTGCGGG CCGAGGTCCG GGCGATGCTC GCCGATCGCG GCGGCGAGGC CGCTTCCGTT
CCGGCCGAAC CGGCCGAACG CGGCGGGGTC CGGATCGTCA ACGAGACGGC GGCGCCGCGC
CCGACGGTCG AGGCCCCCGC TCCGGCCGAG CCCGAACGGC CGCAGCCGCC GACGGTCGTC
CGGCTGCCGG AGTGGCCCGC CGCTCCTGCC GCCCCCGCCG AACCGGCCGA GCCCGGCATC
GTCGAGCGCG GCTTCGCGGC GGCGCGCGAC TGGCTGCTGG GCGGCAACAC CATCGTCCGC
GCCGGCCTCG TCGTGCTGTT CATCGGCCTC GCCTTCCTCG CGCGCTGGGC GGCCGGGGCC
GGGCTGCTGC CGATCGAGGC GCGGCTGGCG CTGGTCGCGG CGGCGGGGAT CGCGCTGCTC
GCGGTCGGCT TCAACCGGCG GACCGCGCGC CCCGGCTTCG CGCTGGCGTT GCAGGGCGGC
GGCGTCGCCA TCCTCTATCT GACGATCTTC GCGGCGGCGG CGCTCTATCC GATCCTGCCG
CTGCCCGCCG CCTTCGCGCT GATGGTGCTG GTCTGCGCCG CCGCCGTCGC GCTGGCGCTG
CTCCAGGACG CGCAGGGCCT CGCCGCCGCC GCCTTCGCGG GCGGCTATGC GGTGCCGCTG
CTGCTCGGCG GCGATGGCGG GCCGGTGGCG GTGATGTTCG GCTATCATCT GCTGCTCAAC
CTCGGCGTGC TCGCTCTTGC CTGGAAGAAG GCGTGGCGCA GCATCAACCT GATCGGCTTC
GCCGCGACCT TCGGCGTCGC CATGCTGTGG GGCGCGACCA GCTACCGGCC GCAGGATTAT
GCGGTCGCGC AGCCCTTCCT GATCGTCTCG GTGCTGATCT ATCTCGCCAT CGCGATCCTC
TATGCGCGCA ACAGCGAGAG CCGGGCCGGG CGCTTCGTCG ACAGCAGCCT GCTGTTCGGC
ACCGCGCTCG CCGGCTTCGG GCTGGAGACC GGGCTGGTCG CGGCGTTCGA CTATGGCGCG
GCCTTCGCCG CGCTCGGCTT CGCGGCGCTC TACCTCGGCC TCGCGGTCGC GGTGCGGCGG
CGCGGCGGCG ACGGCTACCG GCTGCTCGCC GAGACGATGC TGGCGATCGG CGTCGGCTTC
GTCACCCTCG CCATTCCGCT CGCGCTCGGC GCGCGCTGGA CCGGATCGGC CTGGGCGCTC
GAAGGCGCGG GCGCCTTCTG GGTCGGGATG CGGCAGGCGC GCTGGATGCC GCGCGCCTTC
GGCCTGCTGC TCCAGGGCGT CGCCGCGCTG ATGTTCCTCG CCCTGCTCGA AAGCGGGCCG
CAGGCGCTGC CGATCGTCAA TCCGGTGTTC CTGACCGGGC TGCTCGCGGC GCTGCCGGCG
CTGCTCACCG CCTGGTGGCT GCGCCTGCCG CCGCTGCCGC ACAGCGGATC GCGCCCCGCC
CGTGCCTATG CGGGGGTGGA GGCGATGCTC GGCAAGCCCG TCTTCCTCGC CGGCTTCCTG
CTGTGGTCGC TGGCGCTGAT CGCCGAGATT TGCCGCACTA TGCCCTCCCC GGTGGCCGGC
GGCGGCGCGG TGCCGGTGTT CGCGGCGGCG ACGCAGCAGC TGCTGACGAT GGTCGCGCTC
GTCGCCAGCG CGTGGGTCGC GGCCCTGGTC GGGCGGCGGC TGCGCTGGGA GGTCGCGACC
TGGCCCGGCC GGGTCACGCT GGTCGTGCTC GCCGGGACGT GGATCGGGCA GGCCGCGCTC
AACCACCATG TCCTCTACCA TCCCGGCTGG ATCGCCTGGA TCGTCGCGGT CGGCCTGCAC
CTCCACCTGC TCCACGCCAA CGACCATGAC GCGGAGGGCG CCGGCCAGCG CCTGCTCCAG
CGGCTCGGCC ATGTCGGCGG GGTGTGGCTG GCGGTGGCGC TGATCGCCGA CGCGCTGTGG
CTGGGGATCG ACCGCGCCGC GCTGTGGGAC AGCAGCTGGG CGGGGGTGGT GTTCCTCGTC
GCGGCGGTGG CGGTGCTCGC CCTGCTCGCG GTCTGGGCGG GCGGCGCGGC ACGGCGGCCG
GCCGGGGAGC GGCGCTGGCC GCTGGACCGC CACCTCGCCG GCTATCATGC GCAGGCGGCG
CTGCCGGTCG CGGCGCTGGT CTATGGCGGC TCGCTCGCCG CCGCGCTGCT CGCCGAGGGC
GATTCCGCGC CGCTGCCCTA TATGCCGCTG CTCAATCCGG TCGAGCTGAC CCTGGCGCTG
GCGCTCGCGG TGCTGGTGCT GTGGCGGCGC AGCCTGATCG CGGTCGCCCC GCCCTATGCC
GGCTTCGGCT GGGTGGGCGG ACGCGGCGCG TGGATGGCGC TGGCGGGACT CGGCTTCGTC
GACGTCAACA TGCTGTGGCT GCGCTTCGCC CACCACTATC TGGGCGTCGC CTGGGATGCC
GACGCGCTGC TCGGATCGGC GGTGGTGCAG GCGGGGCTCA CCATCCTGTG GACGCTGCTC
TCGCTCGGCC TGATGCTGTT CGCGCATCGC CGGGCGCAGC GCGGCGTGTG GATCGCAGGG
GCGGCGCTGC TCGTCGTCGT GGTGCTCAAG CTGTTCTTCG TCGACCTGTC GAACGCCAGC
GGCGGCGCGC GGATCGTGAC CTTCATCGTC GTCGGCGCGT TGATGCTGGT GGTCGGCTAT
TTCGCGCCGC TGCCGCCGCG TGGAGACGAG TCGAAGGACG CGGAGACGAA GGAGGCCGCG
GCATGA
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| Protein sequence | MILWGLVVGA LFGLFAADFE QYGMILGAIV GAGAGWGLRA AVRAEVRAML ADRGGEAASV
PAEPAERGGV RIVNETAAPR PTVEAPAPAE PERPQPPTVV RLPEWPAAPA APAEPAEPGI
VERGFAAARD WLLGGNTIVR AGLVVLFIGL AFLARWAAGA GLLPIEARLA LVAAAGIALL
AVGFNRRTAR PGFALALQGG GVAILYLTIF AAAALYPILP LPAAFALMVL VCAAAVALAL
LQDAQGLAAA AFAGGYAVPL LLGGDGGPVA VMFGYHLLLN LGVLALAWKK AWRSINLIGF
AATFGVAMLW GATSYRPQDY AVAQPFLIVS VLIYLAIAIL YARNSESRAG RFVDSSLLFG
TALAGFGLET GLVAAFDYGA AFAALGFAAL YLGLAVAVRR RGGDGYRLLA ETMLAIGVGF
VTLAIPLALG ARWTGSAWAL EGAGAFWVGM RQARWMPRAF GLLLQGVAAL MFLALLESGP
QALPIVNPVF LTGLLAALPA LLTAWWLRLP PLPHSGSRPA RAYAGVEAML GKPVFLAGFL
LWSLALIAEI CRTMPSPVAG GGAVPVFAAA TQQLLTMVAL VASAWVAALV GRRLRWEVAT
WPGRVTLVVL AGTWIGQAAL NHHVLYHPGW IAWIVAVGLH LHLLHANDHD AEGAGQRLLQ
RLGHVGGVWL AVALIADALW LGIDRAALWD SSWAGVVFLV AAVAVLALLA VWAGGAARRP
AGERRWPLDR HLAGYHAQAA LPVAALVYGG SLAAALLAEG DSAPLPYMPL LNPVELTLAL
ALAVLVLWRR SLIAVAPPYA GFGWVGGRGA WMALAGLGFV DVNMLWLRFA HHYLGVAWDA
DALLGSAVVQ AGLTILWTLL SLGLMLFAHR RAQRGVWIAG AALLVVVVLK LFFVDLSNAS
GGARIVTFIV VGALMLVVGY FAPLPPRGDE SKDAETKEAA A
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