| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_2795 |
|---|
| Symbol | |
|---|
| ID | 5196865 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sphingomonas wittichii RW1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009511 |
|---|
| Strand | + |
|---|
| Start bp | 3083785 |
|---|
| End bp | 3084897 |
|---|
| Gene Length | 1113 bp |
|---|
| Protein Length | 370 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 640582347 |
|---|
| Product | DNA polymerase III subunit beta |
|---|
| Protein accession | YP_001263287 |
|---|
| Protein GI | 148555705 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG0592] DNA polymerase sliding clamp subunit (PCNA homolog) |
|---|
| TIGRFAM ID | [TIGR00148] UbiD family decarboxylases
[TIGR00663] DNA polymerase III, beta subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 30 |
|---|
| Plasmid unclonability p-value | 0.924667 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 12 |
|---|
| Fosmid unclonability p-value | 0.594035 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAGGCTA CGATCGAACG CGCGACGCTT CTCAAGAGTC TGGGTCACGT CCAGTCGGTC
GTCGAACGGC GCAACACAAT CCCGATCCTG TCGAACGTGC TGATCGAGGC GACGGCCGAG
GGCACGCTCC GGCTGATGGC GACCGACCTC GACCTGCAGA TCGTCGAGGC CGTCCCCGCC
GCGGTCGACC AGCCGGGCGC CACCACCGTG TCGGCGCACA CGCTGTTCGA CATCGCCCGC
AAGCTGCCCG AGGGGTCGCA GGTCCAGCTC TCGGCCGCCG AGGGCAAGAT GCAGGTCGTC
GCCGGCCGCG CCCGCTTCAA CCTGCAGACG CTGCCCAAGG ACGATTTCCC GATGATCGCC
GAGGGCGAGC TGCCGACCCG GTTCGAGCTC CCCGCCGAGA CGCTCAAGCA GCTGATCGAC
AAGACCCGCT TCGCGATCTC GACCGAAGAG ACCCGCTATT ATCTCAACGG CATCTTCTTC
CATGTGCAGG ACGAAGGCTC GCCGGTGCTG AAGGCCGCCG CGACCGACGG CCACCGCCTC
GCCCGCGTCA CCATCGCCCG CCCCGACGGC GCCGAGGGGA TGCCCGACAT CATCATCCCG
CGCAAATGCG TGGGCGAGCT GCGCAAGCTG CTCGACGAGG TCGACGGTTC GGTCGACATC
ACCCTGTCGT CGACCAAGAT CCGCTTCGGC CTGGGCACCG CGATCCTGAC CTCGAAGCTG
ATCGACGGCA CCTTCCCCGA TTACAACCGG GTGATCCCGA CCGCGAACGA CAAGCTGCTC
AAGATCGATC CGAAGAGCTT CATGGAGGGC GTCGACCGCG TCGCCACCAT CGCCTCGGAA
AAGACCCGCG CGGTCAAGAT GGCGCTCGAC CGCGACAAGA TCACCCTGTC GGTGACGAGC
CCCGAGAACG GCACCGCGGC CGAGGAAGTC CCCGGCGACT ATGCCGCCAC CGGCTTCGAG
ATCGGCTTCA ACGCCCGCTA TCTGCTCGAC ATCCTCGGCC AGATCGACGG CGACACGGTC
GAGGTCCACC TGGCCGACGC CGCCGCGCCG ACGCTGATCC GCGAGAACGA CAAGGCGCCC
GCGCTCTACG TCCTCATGCC GATGCGGGTC TGA
|
|---|
| Protein sequence | MKATIERATL LKSLGHVQSV VERRNTIPIL SNVLIEATAE GTLRLMATDL DLQIVEAVPA
AVDQPGATTV SAHTLFDIAR KLPEGSQVQL SAAEGKMQVV AGRARFNLQT LPKDDFPMIA
EGELPTRFEL PAETLKQLID KTRFAISTEE TRYYLNGIFF HVQDEGSPVL KAAATDGHRL
ARVTIARPDG AEGMPDIIIP RKCVGELRKL LDEVDGSVDI TLSSTKIRFG LGTAILTSKL
IDGTFPDYNR VIPTANDKLL KIDPKSFMEG VDRVATIASE KTRAVKMALD RDKITLSVTS
PENGTAAEEV PGDYAATGFE IGFNARYLLD ILGQIDGDTV EVHLADAAAP TLIRENDKAP
ALYVLMPMRV
|
|---|
| |