Gene Swit_2781 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwit_2781 
Symbol 
ID5197721 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingomonas wittichii RW1 
KingdomBacteria 
Replicon accessionNC_009511 
Strand
Start bp3071799 
End bp3072200 
Gene Length402 bp 
Protein Length133 aa 
Translation table11 
GC content66% 
IMG OID640582334 
Productresponse regulator receiver protein 
Protein accessionYP_001263274 
Protein GI148555692 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGCTGCCG TGGCGAAAAA AATCCTGATT GTCGAGGATA ATGAGCTGAA TCTCCGGCTC 
TTCCGCGACC TGCTCGAAGC GCATGGCGCG GAGGTCAGGA CGGTTCGCGA CGCGCGCGAG
GCCCTCGACG CCATCCGCAT CTTCCTGCCC CAGCTCGTGA TCATGGACAT CCAGCTCCCG
CACATCAGCG GGGTCGAACT GATTCGCATG ATGAAGACCG ACGGTCAGCT CGAGGCGATC
CCGGTGATGG CGGTGACCGC CTATGCCGGC AAGGGCGACG AGAGCCGGGT GCGCGAGGCG
GGCGCCGACG CCTATGTGTC GAAGCCGATC TCGGTGTCGC GCTTCGTGCT CGCGGTCGAG
GAACTGGCCG GCACGCTCGA CGGCTTCGTC CGCGCGGGGT AG
 
Protein sequence
MAAVAKKILI VEDNELNLRL FRDLLEAHGA EVRTVRDARE ALDAIRIFLP QLVIMDIQLP 
HISGVELIRM MKTDGQLEAI PVMAVTAYAG KGDESRVREA GADAYVSKPI SVSRFVLAVE
ELAGTLDGFV RAG